The RAST Server: rapid annotations using subsystems technology RK Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ... BMC genomics 9 (1), 75, 2008 | 10635 | 2008 |
DNase expression allows the pathogen group A Streptococcus to escape killing in neutrophil extracellular traps JT Buchanan, AJ Simpson, RK Aziz, GY Liu, SA Kristian, M Kotb, ... Current biology 16 (4), 396-400, 2006 | 825 | 2006 |
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ... Nature communications 5, 4498, 2014 | 682 | 2014 |
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities JJ Davis, AR Wattam, RK Aziz, T Brettin, R Butler, RM Butler, P Chlenski, ... Nucleic acids research 48 (D1), D606-D612, 2020 | 624 | 2020 |
DNase Sda1 provides selection pressure for a switch to invasive group A streptococcal infection MJ Walker, A Hollands, ML Sanderson-Smith, JN Cole, JK Kirk, ... Nature medicine 13 (8), 981-985, 2007 | 434 | 2007 |
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies S Akhter, RK Aziz, RA Edwards Nucleic acids research 40 (16), e126-e126, 2012 | 383 | 2012 |
Transposases are the most abundant, most ubiquitous genes in nature RK Aziz, M Breitbart, RA Edwards Nucleic acids research 38 (13), 4207-4217, 2010 | 322 | 2010 |
Minimum information about an uncultivated virus genome (MIUVIG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29, 2019 | 312 | 2019 |
Helicobacter pylori: a poor man's gut pathogen? MM Khalifa, RR Sharaf, RK Aziz Gut pathogens 2 (1), 2, 2010 | 301 | 2010 |
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments JM Monk, P Charusanti, RK Aziz, JA Lerman, N Premyodhin, JD Orth, ... Proceedings of the National Academy of Sciences 110 (50), 20338-20343, 2013 | 286 | 2013 |
Invasive M1T1 group A Streptococcus undergoes a phase‐shift in vivo to prevent proteolytic degradation of multiple virulence factors by SpeB RK Aziz, MJ Pabst, A Jeng, R Kansal, D Low, V Nizet, M Kotb Molecular microbiology 51 (1), 123-134, 2004 | 228 | 2004 |
Rise and Persistence of Global M1T1 Clone of Streptococcus pyogenes RK Aziz, M Kotb Emerging infectious diseases 14 (10), 1511-1517, 2008 | 217 | 2008 |
Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity E Bosi, JM Monk, RK Aziz, M Fondi, V Nizet, BØ Palsson Proceedings of the National Academy of Sciences 113 (26), E3801-E3809, 2016 | 209 | 2016 |
SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models RK Aziz, S Devoid, T Disz, RA Edwards, CS Henry, GJ Olsen, R Olson, ... PloS one 7 (10), e48053, 2012 | 198 | 2012 |
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage R Edwards, A Vega, H Norman, MC Ohaeri, K Levi, E Dinsdale, O Cinek, ... Nature Microbiology 4, 1727–1736, 2019 | 166 | 2019 |
Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes R Saad, MR Rizkallah, RK Aziz Gut Pathogens 4 (1), 16, 2012 | 154 | 2012 |
Pharmacomicrobiomics: The impact of human microbiome variations on systems pharmacology and personalized therapeutics M ElRakaiby, BE Dutilh, MR Rizkallah, A Boleij, JN Cole, RK Aziz OMICS: A Journal of Integrative Biology, 2014 | 142 | 2014 |
Contaminated water as a source of Helicobacter pylori infection RK Aziz, MM Khalifa, RR Sharaf Journal of Advanced Research, 2015 | 139 | 2015 |
Mosaic prophages with horizontally acquired genes account for the emergence and diversification of the globally disseminated M1T1 clone of Streptococcus pyogenes RK Aziz, RA Edwards, WW Taylor, DE Low, A McGeer, M Kotb Journal of bacteriology 187 (10), 3311-3318, 2005 | 139 | 2005 |
Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee EM Adriaenssens, MB Sullivan, P Knezevic, LJ van Zyl, BL Sarkar, ... Archives of Virology, 1-8, 2020 | 129 | 2020 |