Bat coronaviruses related to SARS-CoV-2 and infectious for human cells S Temmam, K Vongphayloth, E Baquero, S Munier, M Bonomi, ... Nature 604 (7905), 330-336, 2022 | 456* | 2022 |
GEMME: a simple and fast global epistatic model predicting mutational effects E Laine, Y Karami, A Carbone Molecular Biology and Evolution 36 (11), 2604–2619, 2019 | 98 | 2019 |
DaReUS-Loop: a web server to model multiple loops in homology models Y Karami, J Rey, G Postic, S Murail, P Tufféry, SJ De Vries Nucleic Acids Research 47 (W1), W423-W428, 2019 | 39 | 2019 |
DaReUS-Loop: accurate loop modeling using fragments from remote or unrelated proteins Y Karami, F Guyon, S De Vries, P Tufféry Scientific Reports 8 (1), 2018 | 39 | 2018 |
“Infostery” analysis of short molecular dynamics simulations identifies highly sensitive residues and predicts deleterious mutations Y Karami, T Bitard-Feildel, E Laine, A Carbone Scientific Reports 8 (1), 16126, 2018 | 22 | 2018 |
Dissecting protein architecture with communication blocks and communicating segment pairs Y Karami, E Laine, A Carbone BMC Bioinformatics, 2016 | 21 | 2016 |
Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology H Khakzad, L Happonen, Y Karami, S Chowdhury, GE Bergdahl, M Nilges, ... PLoS Computational Biology 17 (1), e1008169, 2021 | 17 | 2021 |
Computational and biochemical analysis of type IV pilus dynamics and stability Y Karami, A López-Castilla, A Ori, JL Thomassin, B Bardiaux, T Malliavin, ... Structure 29 (12), 1397-1409, 2021 | 12 | 2021 |
Protein structure prediction using bio-inspired algorithm: A review Y Karami, H Khakzad, H Shirazi, S Arab The 16th CSI international symposium on artificial intelligence and signal …, 2012 | 10 | 2012 |
E-Biothon: an experimental platform for BioInformatics M Daydé, B Depardon, A Franc, JF Gibrat, R Guilllier, Y Karami, F Sutter, ... 2015 Computer Science and Information Technologies (CSIT), 1-4, 2015 | 6 | 2015 |
Accelerating protein structure prediction using particle swarm optimization on GPU H Khakzad, Y Karami, SS Arab Biorxiv, 022434, 2015 | 6 | 2015 |
van der, Brey, P., Eloit, M., 2021. Coronaviruses with a SARS-CoV-2-like receptor-binding domain allowing ACE2-mediated entry into human cells isolated from bats of Indochinese … S Temmam, K Vongphayloth, EB Salazar, S Munier, M Bonomi, ... Review. https://doi. org/10.21203/rs 3, 0 | 4 | |
Automatic Bayesian Weighting for SAXS data YG Spill*, Y Karami*, P Maisonneuve, N Wolff, M Nilges Frontiers in molecular biosciences 8, 2021 | 3 | 2021 |
The hinge-engineered IgG1-IgG3 hybrid subclass IgGh47 potently enhances Fc-mediated function of anti-streptococcal and SARS-CoV-2 antibodies A Izadi, Y Karami, E Bratanis, S Wrighton, H Khakzad, M Nyblom, ... Nature Communications 15 (1), 3600, 2024 | 2 | 2024 |
Exploring a structural data mining approach to design linkers for head-to-tail peptide cyclization Y Karami, S Murail, J Giribaldi, B Lefranc, F Defontaine, O Lesouhaitier, ... Journal of Chemical Information and Modeling 63 (20), 6436-6450, 2023 | 2 | 2023 |
Predicting substitutions to modulate disorder and stability in coiled-coils Y Karami, P Saighi, R Vanderhaegen, D Gerlier, S Longhi, E Laine, ... BMC bioinformatics 21, 1-20, 2020 | 1 | 2020 |
Joint analysis of dynamically correlated networks and coevolved residue clusters: large-scale analysis and methods for predicting the effects of genetic disease associated … Y Karami Université Pierre et Marie Curie-Paris VI, 2016 | 1 | 2016 |
Cysteine hyperoxidation rewires communication pathways in the nucleosome and destabilizes the dyad Y Karami, E Bignon Computational and Structural Biotechnology Journal 23, 1387-1396, 2024 | | 2024 |
Structure and Dynamics of Type 4a Pili and Type 2 Secretion System Endopili N Izadi-Pruneyre, Y Karami, M Nilges Macromolecular Protein Complexes V: Structure and Function, 549-563, 2024 | | 2024 |
De nouveaux coronavirus de chauve-souris similaires à SARS-CoV-2 éclairent l'origine de la pandémie de COVID-19 S Temmam, K Vongphayloth, EB Salazar, S Munier, M Bonomi, ... Journées Francophones de Virologie, 2022 | | 2022 |