| A comparative study of the gut microbiota in immune-mediated inflammatory diseases—does a common dysbiosis exist? JD Forbes, C Chen, NC Knox, RA Marrie, H El-Gabalawy, T de Kievit, ... Microbiome 6, 1-15, 2018 | 355 | 2018 |
| Metagenomics: the next culture-independent game changer JD Forbes, NC Knox, J Ronholm, F Pagotto, A Reimer Frontiers in microbiology 8, 1069, 2017 | 299 | 2017 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... Microbial genomics 3 (6), e000116, 2017 | 149 | 2017 |
| Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ... MBio 4 (4), 10.1128/mbio. 00398-13, 2013 | 138 | 2013 |
| The gut microbiome as a target for IBD treatment: are we there yet? NC Knox, JD Forbes, G Van Domselaar, CN Bernstein Current treatment options in gastroenterology 17, 115-126, 2019 | 121 | 2019 |
| A fungal world: could the gut mycobiome be involved in neurological disease? JD Forbes, CN Bernstein, H Tremlett, G Van Domselaar, NC Knox Frontiers in microbiology 9, 427748, 2019 | 99 | 2019 |
| A comparison of whole genome sequencing of SARS-CoV-2 using amplicon-based sequencing, random hexamers, and bait capture JA Nasir, RA Kozak, P Aftanas, AR Raphenya, KM Smith, F Maguire, ... Viruses 12 (8), 895, 2020 | 96 | 2020 |
| Characterization of the gut-associated microbiome in inflammatory pouch complications following ileal pouch-anal anastomosis AD Tyler, N Knox, B Kabakchiev, R Milgrom, R Kirsch, Z Cohen, ... PloS one 8 (9), e66934, 2013 | 95 | 2013 |
| Highlighting clinical metagenomics for enhanced diagnostic decision-making: a step towards wider implementation JD Forbes, NC Knox, CL Peterson, AR Reimer Computational and structural biotechnology journal 16, 108-120, 2018 | 78 | 2018 |
| The gut microbiome in inflammatory bowel disease: lessons learned from other immune-mediated inflammatory diseases NC Knox, JD Forbes, CL Peterson, G Van Domselaar, CN Bernstein Official journal of the American College of Gastroenterology| ACG 114 (7 …, 2019 | 75 | 2019 |
| Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis AD Tyler, S Christianson, NC Knox, P Mabon, J Wolfe, G Van Domselaar, ... PLoS One 11 (2), e0148676, 2016 | 73 | 2016 |
| A primer on infectious disease bacterial genomics T Lynch, A Petkau, N Knox, M Graham, G Van Domselaar Clinical microbiology reviews 29 (4), 881-913, 2016 | 57 | 2016 |
| Targeted 16S rRNA high‐throughput sequencing to characterize microbial communities during composting of livestock mortalities VL Tkachuk, DO Krause, NC Knox, AC Hamm, F Zvomuya, KH Ominski, ... Journal of applied microbiology 116 (5), 1181-1194, 2014 | 51 | 2014 |
| A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT … SW Peterson, NC Knox, GR Golding, SD Tyler, AD Tyler, P Mabon, ... PLoS One 11 (3), e0152493, 2016 | 48 | 2016 |
| Comparative genomics reveal that host-innate immune responses influence the clinical prevalence of Legionella pneumophila serogroups MA Khan, N Knox, A Prashar, D Alexander, M Abdel-Nour, C Duncan, ... PLoS One 8 (6), e67298, 2013 | 44 | 2013 |
| Potential To Reduce Escherichia coli Shedding in Cattle Feces by Using Sainfoin (Onobrychis viciifolia) Forage, Tested In Vitro and In Vivo NC Berard, RA Holley, TA McAllister, KH Ominski, KM Wittenberg, ... Applied and Environmental Microbiology 75 (4), 1074-1079, 2009 | 43 | 2009 |
| The gut microbiota in pediatric multiple sclerosis and demyelinating syndromes H Tremlett, F Zhu, D Arnold, A Bar‐Or, CN Bernstein, C Bonner, ... Annals of clinical and translational neurology 8 (12), 2252-2269, 2021 | 42 | 2021 |
| Association between androgen deprivation therapy and mortality among patients with prostate cancer and COVID-19 AL Schmidt, MD Tucker, Z Bakouny, C Labaki, CY Hsu, Y Shyr, ... JAMA network open 4 (11), e2134330-e2134330, 2021 | 40 | 2021 |
| Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones S Tyler, S Tyson, A Dibernardo, M Drebot, EJ Feil, M Graham, NC Knox, ... Scientific Reports 8 (1), 10552, 2018 | 35 | 2018 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microb Genom 3: e000116 A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... | 28 | 2017 |
