Sketching algorithms for genomic data analysis and querying in a secure enclave C Kockan, K Zhu, N Dokmai, N Karpov, MO Kulekci, DP Woodruff, ... Nature methods 17 (3), 295-301, 2020 | 61 | 2020 |
Filter Based Fast Matching of Long Patterns by Using SIMD Instructions. MO Külekci Stringology, 118-128, 2009 | 43 | 2009 |
Fast packed string matching for short patterns S Faro, MO Külekci 2013 Proceedings of the Fifteenth Workshop on Algorithm Engineering and …, 2013 | 39 | 2013 |
Efficient maximal repeat finding using the burrows-wheeler transform and wavelet tree MO Kulekci, JS Vitter, B Xu IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (2), 421-429, 2011 | 33 | 2011 |
Fast multiple string matching using streaming SIMD extensions technology S Faro, MO Külekci International symposium on string processing and information retrieval, 217-228, 2012 | 32 | 2012 |
Efficient algorithms for the order preserving pattern matching problem S Faro, MO Külekci Algorithmic Aspects in Information and Management: 11th International …, 2016 | 29 | 2016 |
Alternative Algorithms for Order-Preserving Matching. T Chhabra, MO Külekci, J Tarhio Stringology, 36-46, 2015 | 27 | 2015 |
Enhanced variable-length codes: Improved compression with efficient random access MO Külekci 2014 Data Compression Conference, 362-371, 2014 | 25 | 2014 |
Fast and flexible packed string matching S Faro, MO Külekci Journal of Discrete Algorithms 28, 61-72, 2014 | 24 | 2014 |
Shortest Unique Substring Query Revisited BX Atalay Mert İleri, M. Oğuzhan Külekci Combinatorial Pattern Matching, Lecture Notes in Computer Science 8486, 172-181, 2014 | 24* | 2014 |
A method to overcome computer word size limitation in bit-parallel pattern matching MO Külekci International Symposium on Algorithms and Computation, 496-506, 2008 | 24 | 2008 |
An Efficient Skip-Search Approach to the Order-Preserving Pattern Matching Problem. D Cantone, S Faro, MO Külekci Stringology, 22-35, 2015 | 21 | 2015 |
Engineering order‐preserving pattern matching with SIMD parallelism T Chhabra, S Faro, MO Külekci, J Tarhio Software: Practice and Experience 47 (5), 731-739, 2017 | 20 | 2017 |
Tara: An algorithm for fast searching of multiple patterns on text files MO Kulekci 2007 22nd international symposium on computer and information sciences, 1-6, 2007 | 17 | 2007 |
A simple yet time-optimal and linear-space algorithm for shortest unique substring queries AM Ileri, MO Külekci, B Xu Theoretical Computer Science 562, 621-633, 2015 | 16 | 2015 |
BLIM: A new bit-parallel pattern matching algorithm overcoming computer word size limitation MO Külekci Mathematics in Computer Science 3 (4), 407-420, 2010 | 15 | 2010 |
On scrambling the Burrows–Wheeler transform to provide privacy in lossless compression MO Külekci Computers & Security 31 (1), 26-32, 2012 | 14 | 2012 |
An infrastructure for Turkish prosody generation in text-to-speech synthesis MO Külekçi, K Oflazer | 11 | 2006 |
Turkish word segmentation using morphological analyzer MO Külekcý, M Özkan Seventh European Conference on Speech Communication and Technology, 2001 | 11 | 2001 |
Non-overlapping indexing-cache obliviously S Hooshmand, P Abedin, MO Külekci, SV Thankachan 29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018), 2018 | 9 | 2018 |