The structure and function of the global citrus rhizosphere microbiome J Xu, Y Zhang, P Zhang, P Trivedi, N Riera, Y Wang, X Liu, G Fan, J Tang, ... Nature communications 9 (1), 1-10, 2018 | 384 | 2018 |
Root microbiota shift in rice correlates with resident time in the field and developmental stage J Zhang, N Zhang, YX Liu, X Zhang, B Hu, Y Qin, H Xu, H Wang, X Guo, ... Science China Life Sciences 61 (6), 613-621, 2018 | 243 | 2018 |
The distribution of tryptophan-dependent indole-3-acetic acid synthesis pathways in bacteria unraveled by large-scale genomic analysis P Zhang, T Jin, S Kumar Sahu, J Xu, Q Shi, H Liu, Y Wang Molecules 24 (7), 1411, 2019 | 119 | 2019 |
Deciphering the composition and functional profile of the microbial communities in Chinese Moutai liquor starters SH Gan, F Yang, SK Sahu, RY Luo, SL Liao, HY Wang, T Jin, L Wang, ... Frontiers in microbiology 10, 1540, 2019 | 117 | 2019 |
Host preference and invasiveness of commensal bacteria in the Lotus and Arabidopsis root microbiota K Wippel, K Tao, Y Niu, R Zgadzaj, N Kiel, R Guan, E Dahms, P Zhang, ... Nature microbiology 6 (9), 1150-1162, 2021 | 104 | 2021 |
An ATAC-seq atlas of chromatin accessibility in mouse tissues C Liu, M Wang, X Wei, L Wu, J Xu, X Dai, J Xia, M Cheng, Y Yuan, ... Scientific data 6 (1), 1-10, 2019 | 102 | 2019 |
Taxonomic structure and functional association of foxtail millet root microbiome T Jin, Y Wang, Y Huang, J Xu, P Zhang, N Wang, X Liu, H Chu, G Liu, ... Gigascience, 2017 | 96 | 2017 |
EasyAmplicon: An easy‐to‐use, open‐source, reproducible, and community‐based pipeline for amplicon data analysis in microbiome research YX Liu, L Chen, T Ma, X Li, M Zheng, X Zhou, L Chen, X Qian, J Xi, H Lu, ... iMeta 2 (1), e83, 2023 | 54 | 2023 |
Differential impact of plant secondary metabolites on the soil microbiota V Schütz, K Frindte, J Cui, P Zhang, S Hacquard, P Schulze-Lefert, ... Frontiers in microbiology 12, 1267, 2021 | 45 | 2021 |
Effect of caloric restriction on BMI, gut microbiota, and blood amino acid levels in non-obese adults H Zou, D Wang, H Ren, K Cai, P Chen, C Fang, Z Shi, P Zhang, J Wang, ... Nutrients 12 (3), 631, 2020 | 45 | 2020 |
Shared features and reciprocal complementation of the Chlamydomonas and Arabidopsis microbiota P Durán, J Flores-Uribe, K Wippel, P Zhang, R Guan, B Melkonian, ... Nature Communications 13 (1), 1-14, 2022 | 34 | 2022 |
Cofunctioning of bacterial exometabolites drives root microbiota establishment F Getzke, MA Hassani, M Crüsemann, M Malisic, P Zhang, Y Ishigaki, ... Proceedings of the National Academy of Sciences 120 (15), e2221508120, 2023 | 28 | 2023 |
Metagenomic Analysis Reveals Microbial Community Structure and Metabolic Potential for Nitrogen Acquisition in the Oligotrophic Surface Water of the Indian Ocean Y Wang, S Liao, Y Gai, G Liu, T Jin, H Liu, L Gram, ML Strube, G Fan, ... Frontiers in Microbiology 12, 229, 2021 | 28 | 2021 |
Deciphering the Microbial Taxonomy and Functionality of Two Diverse Mangrove Ecosystems and Their Potential Abilities To Produce Bioactive Compounds S Liao, Y Wang, H Liu, G Fan, SK Sahu, T Jin, J Chen, P Zhang, L Gram, ... Msystems 5 (5), e00851-19, 2020 | 25 | 2020 |
Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities P Zhang, S Spaepen, Y Bai, S Hacquard, R Garrido-Oter ISME Communications 1 (1), 1-3, 2021 | 10 | 2021 |
ER body‐resident myrosinases and tryptophan specialized metabolism modulate root microbiota assembly AK Basak, A Piasecka, J Hucklenbroich, GM Türksoy, R Guan, P Zhang, ... New Phytologist 241 (1), 329-342, 2024 | 3 | 2024 |
Chromosomal barcodes for simultaneous tracking of near-isogenic bacterial strains in plant microbiota J Ordon, J Thouin, RT Nakano, KW Ma, P Zhang, B Huettel, ... Nature Microbiology, 1-13, 2024 | 2 | 2024 |
Timing of root barriers controls soil-to-shoot integration of rhizosphere status D Shen, K Wippel, S Remmel, P Zhang, N Kuertoes, U Neumann, ... bioRxiv, 2023.04. 19.537470, 2023 | | 2023 |