MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data K Haug, RM Salek, P Conesa, J Hastings, P De Matos, M Rijnbeek, ... Nucleic acids research 41 (D1), D781-D786, 2013 | 701 | 2013 |
DeepRes: a new deep-learning-and aspect-based local resolution method for electron-microscopy maps E Ramírez-Aportela, J Mota, P Conesa, JM Carazo, COS Sorzano IUCrJ 6 (6), 1054-1063, 2019 | 629 | 2019 |
Image processing tools for the validation of CryoEM maps COS Sorzano, JL Vilas, E Ramírez-Aportela, J Krieger, D Del Hoyo, ... Faraday Discussions 240, 210-227, 2022 | 581 | 2022 |
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy JM De la Rosa-Trevin, A Quintana, L Del Cano, A Zaldívar, I Foche, ... Journal of structural biology 195 (1), 93-99, 2016 | 534 | 2016 |
MonoRes: automatic and accurate estimation of local resolution for electron microscopy maps JL Vilas, J Gómez-Blanco, P Conesa, R Melero, JM de la Rosa-Trevín, ... Structure 26 (2), 337-344. e4, 2018 | 228 | 2018 |
MetaboLights: An Open‐Access Database Repository for Metabolomics Data NS Kale, K Haug, P Conesa, K Jayseelan, P Moreno, P Rocca‐Serra, ... Current Protocols in Bioinformatics, 14.13. 1-14.13. 18, 2002 | 186 | 2002 |
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access RM Salek, S Neumann, D Schober, J Hummel, K Billiau, J Kopka, ... Metabolomics 11, 1587-1597, 2015 | 155 | 2015 |
Automatic local resolution-based sharpening of cryo-EM maps E Ramírez-Aportela, JL Vilas, A Glukhova, R Melero, P Conesa, ... Bioinformatics 36 (3), 765-772, 2020 | 128 | 2020 |
MetaboLights: towards a new COSMOS of metabolomics data management C Steinbeck, P Conesa, K Haug, T Mahendraker, M Williams, E Maguire, ... Metabolomics 8, 757-760, 2012 | 99 | 2012 |
The MetaboLights repository: curation challenges in metabolomics RM Salek, K Haug, P Conesa, J Hastings, M Williams, T Mahendraker, ... Database 2013, bat029, 2013 | 68 | 2013 |
Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy COS Sorzano, A Jiménez, J Mota, JL Vilas, D Maluenda, M Martínez, ... Acta Crystallographica Section F: Structural Biology Communications 75 (1 …, 2019 | 62 | 2019 |
Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures R Melero, COS Sorzano, B Foster, JL Vilas, M Martínez, R Marabini, ... IUCrJ 7 (6), 1059-1069, 2020 | 45 | 2020 |
A survey of the use of iterative reconstruction algorithms in electron microscopy COS Sorzano, J Vargas, J Otón, JM De La Rosa-Trevín, JL Vilas, ... BioMed research international 2017 (1), 6482567, 2017 | 40 | 2017 |
FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation E Ramírez-Aportela, D Maluenda, YC Fonseca, P Conesa, R Marabini, ... Nature Communications 12 (1), 42, 2021 | 36 | 2021 |
A new algorithm for high-resolution reconstruction of single particles by electron microscopy COS Sorzano, J Vargas, JM de la Rosa-Trevín, A Jiménez, D Maluenda, ... Journal of structural biology 204 (2), 329-337, 2018 | 34 | 2018 |
Advances in xmipp for cryo–electron microscopy: From xmipp to scipion D Strelak, A Jiménez-Moreno, JL Vilas, E Ramírez-Aportela, ... Molecules 26 (20), 6224, 2021 | 31 | 2021 |
ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation JJ de la Morena, P Conesa, YC Fonseca, FP de Isidro-Gómez, D Herreros, ... Journal of structural biology 214 (3), 107872, 2022 | 30 | 2022 |
Using Scipion for stream image processing at Cryo-EM facilities J Gómez-Blanco, JM de la Rosa-Trevín, R Marabini, L Del Cano, ... Journal of structural biology 204 (3), 457-463, 2018 | 29 | 2018 |
Integration of Cryo-EM Model Building Software in Scipion M Martínez, A Jiménez-Moreno, D Maluenda, E Ramírez-Aportela, ... Journal of Chemical Information and Modeling 60 (5), 2533-2540, 2020 | 25 | 2020 |
Algorithmic robustness to preferred orientations in single particle analysis by CryoEM COS Sorzano, D Semchonok, SC Lin, YC Lo, JL Vilas, A Jiménez-Moreno, ... Journal of Structural Biology 213 (1), 107695, 2021 | 22 | 2021 |