| MEGAN-LR: new algorithms allow accurate binning and easy interactive exploration of metagenomic long reads and contigs DH Huson, B Albrecht, C Bağcı, I Bessarab, A Gorska, D Jolic, ... Biology direct 13, 1-17, 2018 | 170 | 2018 |
| Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ... Nature communications 11 (1), 5281, 2020 | 72 | 2020 |
| Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data K Arumugam, C Bağcı, I Bessarab, S Beier, B Buchfink, A Górska, G Qiu, ... Microbiome 7, 1-13, 2019 | 72 | 2019 |
| The Isolate Caproiciproducens sp. 7D4C2 Produces n-Caproate at Mildly Acidic Conditions From Hexoses: Genome and rBOX Comparison With Related Strains … S Esquivel-Elizondo, C Bağcı, M Temovska, BS Jeon, I Bessarab, ... Frontiers in microbiology 11, 594524, 2021 | 51 | 2021 |
| The complete cDNA sequence of a type II Trichomonas vaginalis virus IN Bessarab, HW Liu, CF Ip, JH Tai Virology 267 (2), 350-359, 2000 | 51 | 2000 |
| Identification and characterization of a type III Trichomonas vaginalis virus in the protozoan pathogen Trichomonas vaginalis IN Bessarab, R Nakajima, HW Liu, JH Tai Archives of virology 156, 285-294, 2011 | 36 | 2011 |
| Recovery of complete genomes and non-chromosomal replicons from activated sludge enrichment microbial communities with long read metagenome sequencing K Arumugam, I Bessarab, MAS Haryono, X Liu, RE Zuniga–Montanez, ... npj Biofilms and Microbiomes 7 (1), 23, 2021 | 33 | 2021 |
| The phylogeny, ecology and ecophysiology of the glycogen accumulating organism (GAO) Defluviicoccus in wastewater treatment plants AM Maszenan, I Bessarab, RBH Williams, S Petrovski, RJ Seviour Water Research 221, 118729, 2022 | 28 | 2022 |
| Characterization of a bi‐directional promoter for divergent transcription of a PHD‐zinc finger protein gene and a ran gene in the protozoan pathogen Giardia lamblia SJ Ong, LC Huang, HW Liu, SC Chang, YC Yang, I Bessarab, JH Tai Molecular microbiology 43 (3), 665-676, 2002 | 15 | 2002 |
| Comparative Genomics of Members of the Genus Defluviicoccus With Insights Into Their Ecophysiological Importance I Bessarab, AM Maszenan, MAS Haryono, K Arumugam, NMMT Saw, ... Frontiers in Microbiology 13, 834906, 2022 | 11 | 2022 |
| Dynamics of the fecal microbiome and antimicrobial resistome in commercial piglets during the weaning period P Suriyaphol, JKH Chiu, N Yimpring, P Tunsagool, W Mhuantong, ... Scientific Reports 11 (1), 18091, 2021 | 8 | 2021 |
| Phase Transitions by an Abundant Protein in the Anammox Extracellular Matrix Mediate Cell-to-Cell Aggregation and Biofilm Formation T Seviour, LL Wong, Y Lu, S Mugunthan, Q Yang, U Shankari, I Bessarab, ... Mbio 11 (5), 2020 | 8 | 2020 |
| Tropical‐based EBPR process: The long‐term stability, microbial community and its response towards temperature stress PK Poh, YH Ong, K Arumugam, T Nittami, HK Yeoh, I Bessarab, R William, ... Water Environment Research 93 (11), 2598-2608, 2021 | 7 | 2021 |
| The isolate Caproiciproducens sp. 7D4C2 produces n-caproate at mildly acidic conditions from hexoses: genome and rBOX comparison with related strains and chain-elongating … S Esquivel-Elizondo, C Bağcı, M Temovska, BS Jeon, I Bessarab, ... | 7 | 2020 |
| Analysis procedures for assessing recovery of high quality, complete, closed genomes from Nanopore long read metagenome sequencing K Arumugam, I Bessarab, MAS Haryono, X Liu, RE Zuniga-Montanez, ... BioRxiv, 2020.03. 12.974238, 2020 | 5 | 2020 |
| Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance. Nat Commun 11: 5281 M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ... | 5 | 2020 |
| Improving recovery of member genomes from enrichment reactor microbial communities using MinION–based long read metagenomics K Arumugam, I Bessarab, X Liu, G Natarajan, DI Drautz–Moses, S Wuertz, ... bioRxiv, 465328, 2018 | 3 | 2018 |
| Genome analysis of Pseudomonas sp. OF001 and Rubrivivax sp. A210 suggests multicopper oxidases catalyze manganese oxidation required for … EB Martínez-Ruiz, M Cooper, J Barrero-Canosa, MAS Haryono, ... BMC genomics 22 (1), 464, 2021 | 2 | 2021 |
| An analysis of the gene coding for the basic neutralizing antigen VP7 of human rotavirus isolate 1407 IN Bessarab, NV Epifanova, NA Novikova, AM Borodin Voprosy virusologii 36 (6), 480-483, 1991 | 2 | 1991 |
| Recovery and Analysis of Long-Read Metagenome-Assembled Genomes K Arumugam, I Bessarab, MAS Haryono, RBH Williams Metagenomic Data Analysis, 235-259, 2023 | | 2023 |
