| Virus detection by high-throughput sequencing of small RNAs: Large-scale performance testing of sequence analysis strategies S Massart, M Chiumenti, K De Jonghe, R Glover, A Haegeman, I Koloniuk, ... Phytopathology 109 (3), 488-497, 2019 | 125 | 2019 |
| Microbial and chemical contamination of water, sediment and soil in the Nakivubo wetland area in Kampala, Uganda S Fuhrimann, M Stalder, MS Winkler, CB Niwagaba, M Babu, G Masaba, ... Environmental monitoring and assessment 187, 1-15, 2015 | 86 | 2015 |
| Investigations on the interplays between Schistosoma mansoni, praziquantel and the gut microbiome PHH Schneeberger, JT Coulibaly, G Panic, C Daubenberger, ... Parasites & vectors 11, 1-12, 2018 | 76 | 2018 |
| Aryl hydrocarbon receptor agonist indigo protects against obesity-related insulin resistance through modulation of intestinal and metabolic tissue immunity YH Lin, H Luck, S Khan, PHH Schneeberger, S Tsai, X Clemente-Casares, ... International Journal of Obesity 43 (12), 2407-2421, 2019 | 61 | 2019 |
| Metagenomic diagnostics for the simultaneous detection of multiple pathogens in human stool specimens from Cote d'Ivoire: a proof-of-concept study PHH Schneeberger, SL Becker, JF Pothier, B Duffy, EK N'Goran, C Beuret, ... Infection, Genetics and Evolution 40, 389-397, 2016 | 45 | 2016 |
| Health risk assessment along the wastewater and faecal sludge management and reuse chain of Kampala, Uganda: a visualization S Fuhrimann, MS Winkler, PHH Schneeberger, CB Niwagaba, J Buwule, ... Geospatial health 9 (1), 251-255, 2014 | 43 | 2014 |
| Large expert-curated database for benchmarking document similarity detection in biomedical literature search P Brown, Y Zhou Database 2019, baz085, 2019 | 35 | 2019 |
| Microbiota analysis optimization for human bronchoalveolar lavage fluid PHH Schneeberger, J Prescod, L Levy, D Hwang, T Martinu, B Coburn Microbiome 7, 1-16, 2019 | 31 | 2019 |
| Transitions in oral and gut microbiome of HPV+ oropharyngeal squamous cell carcinoma following definitive chemoradiotherapy (ROMA LA-OPSCC study) M Oliva, PHH Schneeberger, V Rey, M Cho, R Taylor, AR Hansen, ... British journal of cancer 124 (9), 1543-1551, 2021 | 28 | 2021 |
| Comparative genomics‐informed design of two LAMP assays for detection of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae and discrimination of … M Ruinelli, PHH Schneeberger, P Ferrante, A Bühlmann, M Scortichini, ... Plant Pathology 66 (1), 140-149, 2017 | 28 | 2017 |
| Diagnosis of neglected tropical diseases among patients with persistent digestive disorders (diarrhoea and/or abdominal pain≥ 14 days): a multi-country, prospective, non … K Polman, SL Becker, E Alirol, NK Bhatta, NR Bhattarai, E Bottieau, ... BMC infectious diseases 15, 1-13, 2015 | 27 | 2015 |
| Biological, Serological, and Molecular Characterization of a Highly Divergent Strain of Grapevine leafroll-associated virus 4 Causing Grapevine Leafroll Disease JS Reynard, PHH Schneeberger, JE Frey, S Schaerer Phytopathology 105 (9), 1262-1269, 2015 | 25 | 2015 |
| Off-target effects of tribendimidine, tribendimidine plus ivermectin, tribendimidine plus oxantel-pamoate, and albendazole plus oxantel-pamoate on the human gut microbiota PHH Schneeberger, JT Coulibaly, M Gueuning, W Moser, B Coburn, ... International Journal for Parasitology: Drugs and Drug Resistance 8 (3), 372-378, 2018 | 23 | 2018 |
| First-in-class Microbial Ecosystem Therapeutic 4 (MET4) in combination with immune checkpoint inhibitors in patients with advanced solid tumors (MET4-IO trial) A Spreafico, AA Heirali, DV Araujo, TJ Tan, M Oliva, PHH Schneeberger, ... Annals of Oncology 34 (6), 520-530, 2023 | 22 | 2023 |
| A diagnostic tool for improved detection of Xanthomonas fragariae using a rapid and highly specific LAMP assay designed with comparative genomics M Gétaz, A Bühlmann, PHH Schneeberger, C Van Malderghem, B Duffy, ... Plant Pathology 66 (7), 1094-1102, 2017 | 21 | 2017 |
| Different gut microbial communities correlate with efficacy of albendazole-ivermectin against soil-transmitted helminthiases PHH Schneeberger, M Gueuning, S Welsche, E Hürlimann, J Dommann, ... Nature communications 13 (1), 1063, 2022 | 19 | 2022 |
| Lung allograft microbiome association with gastroesophageal reflux, inflammation, and allograft dysfunction PHH Schneeberger, CYK Zhang, J Santilli, B Chen, W Xu, Y Lee, ... American Journal of Respiratory and Critical Care Medicine 206 (12), 1495-1507, 2022 | 18 | 2022 |
| Experiences and lessons from a multicountry NIDIAG study on persistent digestive disorders in the tropics SL Becker, P Yap, NS Horié, E Alirol, B Barbé, NK Bhatta, NR Bhattarai, ... PLoS neglected tropical diseases 10 (11), e0004818, 2016 | 15 | 2016 |
| Clinical research on neglected tropical diseases: challenges and solutions M Boelaert, Nidiag Consortium PLoS neglected tropical diseases 10 (11), e0004853, 2016 | 13 | 2016 |
| Performance characteristics of next-generation sequencing for the detection of antimicrobial resistance determinants in Escherichia coli genomes and metagenomes AM Rooney, AR Raphenya, RG Melano, C Seah, NR Yee, ... MSystems 7 (3), e00022-22, 2022 | 12 | 2022 |
