The Prevotella copri complex comprises four distinct clades underrepresented in westernized populations A Tett, KD Huang, F Asnicar, H Fehlner-Peach, E Pasolli, N Karcher, ... Cell host & microbe 26 (5), 666-679. e7, 2019 | 343 | 2019 |
Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India J Bengtsson-Palme, F Boulund, J Fick, E Kristiansson, DGJ Larsson Frontiers in microbiology 5, 648, 2014 | 327 | 2014 |
Proteotyping: Proteomic characterization, classification and identification of microorganisms–A prospectus R Karlsson, L Gonzales-Siles, F Boulund, L Svensson-Stadler, ... Systematic and applied microbiology 38 (4), 246-257, 2015 | 109 | 2015 |
Identification and reconstruction of novel antibiotic resistance genes from metagenomes F Berglund, T Österlund, F Boulund, NP Marathe, DGJ Larsson, ... Microbiome 7, 1-14, 2019 | 103 | 2019 |
Effects of sampling strategy and DNA extraction on human skin microbiome investigations RD Bjerre, LW Hugerth, F Boulund, M Seifert, JD Johansen, L Engstrand Scientific reports 9 (1), 17287, 2019 | 91 | 2019 |
Dynamics of the normal gut microbiota: a longitudinal one-year population study in Sweden LM Olsson, F Boulund, S Nilsson, MT Khan, A Gummesson, L Fagerberg, ... Cell host & microbe 30 (5), 726-739. e3, 2022 | 90 | 2022 |
Integration of molecular profiles in a longitudinal wellness profiling cohort A Tebani, A Gummesson, W Zhong, IS Koistinen, T Lakshmikanth, ... Nature communications 11 (1), 4487, 2020 | 83 | 2020 |
No evidence for a placental microbiome in human pregnancies at term I Sterpu, E Fransson, LW Hugerth, J Du, M Pereira, L Cheng, SA Radu, ... American journal of obstetrics and gynecology 224 (3), 296. e1-296. e23, 2021 | 77 | 2021 |
Typing and characterization of bacteria using bottom-up tandem mass spectrometry proteomics F Boulund, R Karlsson, L Gonzales-Siles, A Johnning, N Karami, ... Molecular & Cellular Proteomics 16 (6), 1052-1063, 2017 | 69 | 2017 |
Strategies to improve usability and preserve accuracy in biological sequence databases J Bengtsson‐Palme, F Boulund, R Edström, A Feizi, A Johnning, ... Proteomics 16 (18), 2454-2460, 2016 | 53 | 2016 |
A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences F Boulund, A Johnning, MB Pereira, DGJ Larsson, E Kristiansson BMC genomics 13 (1), 695, 2012 | 43 | 2012 |
Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets F Boulund, F Berglund, CF Flach, J Bengtsson-Palme, NP Marathe, ... BMC genomics 18, 1-9, 2017 | 37 | 2017 |
Dysbiosis of the human oral microbiome during the menstrual cycle and vulnerability to the external exposures of smoking and dietary sugar N Bostanci, MC Krog, LW Hugerth, Z Bashir, E Fransson, F Boulund, ... Frontiers in cellular and infection microbiology 11, 625229, 2021 | 34 | 2021 |
Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by … R Karlsson, L Gonzales-Siles, M Gomila, A Busquets, F Salvà-Serra, ... PloS one 13 (12), e0208804, 2018 | 34 | 2018 |
In vitro assessment of platelet concentrates with multiple electrode aggregometry C Shams Hakimi, C Hesse, H Wallén, F Boulund, A Grahn, A Jeppsson Platelets 26 (2), 132-137, 2015 | 30 | 2015 |
Discovery of species-unique peptide biomarkers of bacterial pathogens by tandem mass spectrometry-based proteotyping R Karlsson, A Thorsell, M Gomila, F Salvà-Serra, HE Jakobsson, ... Molecular & Cellular Proteomics 19 (3), 518-528, 2020 | 27 | 2020 |
Computational and statistical considerations in the analysis of metagenomic data F Boulund, MB Pereira, V Jonsson, E Kristiansson Metagenomics, 81-102, 2018 | 25 | 2018 |
Functional verification of computationally predicted qnr genes CF Flach, F Boulund, E Kristiansson, DGJ Larsson Annals of clinical microbiology and antimicrobials 12, 1-4, 2013 | 23 | 2013 |
Assessment of In Vitro and In Silico Protocols for Sequence-Based Characterization of the Human Vaginal Microbiome LW Hugerth, M Pereira, Y Zha, M Seifert, V Kaldhusdal, F Boulund, ... Msphere 5 (6), 10.1128/msphere. 00448-20, 2020 | 20 | 2020 |
Multiomics and digital monitoring during lifestyle changes reveal independent dimensions of human biology and health F Marabita, T James, A Karhu, H Virtanen, K Kettunen, H Stenlund, ... Cell systems 13 (3), 241-255. e7, 2022 | 13 | 2022 |