Determination of ensemble-average pairwise root mean-square deviation from experimental B-factors A Kuzmanic, B Zagrovic Biophysical journal 98 (5), 861-871, 2010 | 394 | 2010 |
Deficient endoplasmic reticulum-mitochondrial phosphatidylserine transfer causes liver disease MI Hernández-Alvarez, D Sebastián, S Vives, S Ivanova, P Bartoccioni, ... Cell 177 (4), 881-895. e17, 2019 | 301 | 2019 |
Biomolecular simulations: From dynamics and mechanisms to computational assays of biological activity DJ Huggins, PC Biggin, MA Dämgen, JW Essex, SA Harris, ... Wiley Interdisciplinary Reviews: Computational Molecular Science 9 (3), e1393, 2019 | 155 | 2019 |
Investigating cryptic binding sites by molecular dynamics simulations A Kuzmanic, GR Bowman, J Juarez-Jimenez, J Michel, FL Gervasio Accounts of chemical research 53 (3), 654-661, 2020 | 132 | 2020 |
X-ray refinement significantly underestimates the level of microscopic heterogeneity in biomolecular crystals A Kuzmanic, NS Pannu, B Zagrovic Nature communications 5 (1), 3220, 2014 | 124 | 2014 |
The architecture of EGFR’s basal complexes reveals autoinhibition mechanisms in dimers and oligomers LC Zanetti-Domingues, D Korovesis, SR Needham, CJ Tynan, S Sagawa, ... Nature communications 9 (1), 4325, 2018 | 79 | 2018 |
Changes in the free-energy landscape of p38α MAP kinase through its canonical activation and binding events as studied by enhanced molecular dynamics simulations A Kuzmanic, L Sutto, G Saladino, AR Nebreda, FL Gervasio, M Orozco Elife 6, e22175, 2017 | 64 | 2017 |
Importance of the force field choice in capturing functionally relevant dynamics in the von Willebrand factor A Kuzmanic, RB Pritchard, DF Hansen, FL Gervasio The Journal of Physical Chemistry Letters 10 (8), 1928-1934, 2019 | 41 | 2019 |
On the contribution of linear correlations to quasi-harmonic conformational entropy in proteins AA Polyansky, A Kuzmanic, M Hlevnjak, B Zagrovic Journal of Chemical Theory and Computation 8 (10), 3820-3829, 2012 | 26 | 2012 |
The Structure of the Pro-domain of Mouse proNGF in Contact with the NGF Domain R Yan, H Yalinca, F Paoletti, F Gobbo, L Marchetti, A Kuzmanic, D Lamba, ... Structure 27 (1), 78-89. e3, 2019 | 20 | 2019 |
Wiley Interdiscip DJ Huggins, PC Biggin, MA Dämgen, JW Essex, SA Harris, ... Rev.: Comput. Mol. Sci 9 (3), e1393, 2019 | 20 | 2019 |
MK2 degradation as a sensor of signal intensity that controls stress-induced cell fate N Gutierrez-Prat, M Cubillos-Rojas, B Cánovas, A Kuzmanic, J Gupta, ... Proceedings of the National Academy of Sciences 118 (29), e2024562118, 2021 | 17 | 2021 |
An in-depth look at DNA crystals through the prism of molecular dynamics simulations A Kuzmanic, PD Dans, M Orozco Chem 5 (3), 649-663, 2019 | 14 | 2019 |
Dependence of protein crystal stability on residue charge states and ion content of crystal solvent A Kuzmanic, B Zagrovic Biophysical Journal 106 (3), 677-686, 2014 | 13 | 2014 |
Dynamics may significantly influence the estimation of interatomic distances in biomolecular X-ray structures A Kuzmanic, D Kruschel, WF van Gunsteren, NS Pannu, B Zagrovic Journal of molecular biology 411 (1), 286-297, 2011 | 13 | 2011 |
Molecular dynamics study of the DFG flip in p38alpha MAP kinase A Kuzmanic, R Soliva, AR Nebreda, M Orozco EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S169-S169, 2015 | | 2015 |
Implications of conformational heterogeneity in protein crystals: from interatomic distance measurements to entropy estimation A Kuzmanic, AA Polyansky, R Zubac, M Hlevnjak, D Kruschel, ... Acta Crystallographica Section A 68, s110-s110, 2012 | | 2012 |
Cloning of His-tagged ssb gene and its expression in Streptomyces lividans A Kuzmanić | | 2007 |
The intimate knowledge of DNA crystals revealed by molecular dynamics simulations A Kuzmanic, PD Dans, M Orozco | | |