Long-term model predictive control of gene expression at the population and single-cell levels J Uhlendorf, A Miermont, T Delaveau, G Charvin, F Fages, S Bottani, ... Proceedings of the National Academy of Sciences 109 (35), 14271-14276, 2012 | 257 | 2012 |
Validation of qualitative models of genetic regulatory networks by model checking: Analysis of the nutritional stress response in Escherichia coli G Batt, D Ropers, H De Jong, J Geiselmann, R Mateescu, M Page, ... Bioinformatics 21 (suppl 1), i19-i28, 2005 | 248 | 2005 |
Qualitative simulation of the initiation of sporulation in Bacillus subtilis H De Jong, J Geiselmann, G Batt, C Hernandez, M Page Bulletin of Mathematical Biology 66 (2), 261-299, 2004 | 179 | 2004 |
Balancing a genetic toggle switch by real-time feedback control and periodic forcing JB Lugagne, SS Carrillo, M Kirch, A Köhler, G Batt, P Hersen Nature Communications 8 (1), 1671, 2017 | 176 | 2017 |
Robustness analysis and tuning of synthetic gene networks G Batt, B Yordanov, R Weiss, C Belta Bioinformatics 23 (18), 2415-2422, 2007 | 167 | 2007 |
A platform for rapid prototyping of synthetic gene networks in mammalian cells X Duportet, L Wroblewska, P Guye, Y Li, J Eyquem, J Rieders, T Rimchala, ... Nucleic acids research 42 (21), 13440-13451, 2014 | 158 | 2014 |
A general computational method for robustness analysis with applications to synthetic gene networks A Rizk, G Batt, F Fages, S Soliman Bioinformatics 25 (12), i169-i178, 2009 | 146 | 2009 |
On a continuous degree of satisfaction of temporal logic formulae with applications to systems biology A Rizk, G Batt, F Fages, S Soliman Computational Methods in Systems Biology: 6th International Conference CMSB …, 2008 | 126 | 2008 |
From cardiac cells to genetic regulatory networks R Grosu, G Batt, F Fenton, J Glimm, C Le Guernic, S Smolka, E Bartocci Computer Aided Verification, 396-411, 2011 | 125 | 2011 |
What population reveals about individual cell identity: Single-cell parameter estimation of models of gene expression in yeast A Llamosi, AM Gonzalez-Vargas, C Versari, E Cinquemani, ... PLoS computational biology 12 (2), e1004706, 2016 | 102 | 2016 |
Efficient parameter search for qualitative models of regulatory networks using symbolic model checking G Batt, M Page, I Cantone, G Goessler, P Monteiro, H De Jong Bioinformatics 26 (18), i603-i610, 2010 | 86 | 2010 |
Temporal logic analysis of gene networks under parameter uncertainty G Batt, C Belta, R Weiss Automatic Control, IEEE Transactions on 53 (Special Issue), 215-229, 2008 | 82 | 2008 |
Symbolic Reachability Analysis of Genetic Regulatory Networks using Qualitative Abstractions G Batt, D Ropers, H De Jong, M Page, J Geiselmann | 78* | 2007 |
Model checking genetic regulatory networks with parameter uncertainty G Batt, C Belta, R Weiss Hybrid systems: computation and control, 61-75, 2007 | 74 | 2007 |
Continuous valuations of temporal logic specifications with applications to parameter optimization and robustness measures A Rizk, G Batt, F Fages, S Soliman Theoretical Computer Science 412 (26), 2827-2839, 2011 | 73 | 2011 |
Modeling Dynamics of Cell-to-Cell Variability in TRAIL-Induced Apoptosis Explains Fractional Killing and Predicts Reversible Resistance F Bertaux, S Stoma, D Drasdo, G Batt PLoS computational biology 10 (10), e1003893, 2014 | 72 | 2014 |
Symbolic reachability analysis of genetic regulatory networks using discrete abstractions G Batt, H De Jong, M Page, J Geiselmann Automatica 44 (4), 982-989, 2008 | 71 | 2008 |
Approximating continuous systems by timed automata O Maler, G Batt Formal methods in systems biology, 77-89, 2008 | 67 | 2008 |
Long-term tracking of budding yeast cells in brightfield microscopy: CellStar and the Evaluation Platform C Versari, S Stoma, K Batmanov, A Llamosi, F Mroz, A Kaczmarek, ... Journal of The Royal Society Interface 14 (127), 20160705, 2017 | 66 | 2017 |
Qualitative analysis and verification of hybrid models of genetic regulatory networks: Nutritional stress response in Escherichia coli G Batt, D Ropers, H De Jong, J Geiselmann, M Page, D Schneider Hybrid Systems: Computation and Control, 134-150, 2005 | 66 | 2005 |