| Bottom‐up and top‐down proteomic approaches for the identification, characterization, and quantification of the low molecular weight proteome with focus on short open reading … L Cassidy, PT Kaulich, S Maaß, J Bartel, D Becher, A Tholey Proteomics 21 (23-24), 2100008, 2021 | 40 | 2021 |
| Multi-protease approach for the improved identification and molecular characterization of small proteins and short open reading frame-encoded peptides PT Kaulich, L Cassidy, J Bartel, RA Schmitz, A Tholey Journal of Proteome Research 20 (5), 2895-2903, 2021 | 38 | 2021 |
| Depletion of high-molecular-mass proteins for the identification of small proteins and short open reading frame encoded peptides in cellular proteomes L Cassidy, PT Kaulich, A Tholey Journal of proteome research 18 (4), 1725-1734, 2019 | 35 | 2019 |
| Multidimensional separation schemes enhance the identification and molecular characterization of low molecular weight proteomes and short open reading frame-encoded peptides in … L Cassidy, AO Helbig, PT Kaulich, K Weidenbach, RA Schmitz, A Tholey Journal of proteomics 230, 103988, 2021 | 33 | 2021 |
| Improved identification of proteoforms in top-down proteomics using FAIMS with internal CV stepping PT Kaulich, L Cassidy, K Winkels, A Tholey Analytical Chemistry 94 (8), 3600-3607, 2022 | 28 | 2022 |
| Complementarity of different SDS‐PAGE gel staining methods for the identification of short open reading frame‐encoded peptides PT Kaulich, L Cassidy, K Weidenbach, RA Schmitz, A Tholey Proteomics 20 (19-20), 2000084, 2020 | 19 | 2020 |
| Size-based proteome fractionation through polyacrylamide gel electrophoresis combined with LC–FAIMS–MS for in-depth top-down proteomics A Takemori, PT Kaulich, L Cassidy, N Takemori, A Tholey Analytical Chemistry 94 (37), 12815-12821, 2022 | 16 | 2022 |
| Proteoforms expand the world of microproteins and short open reading frame-encoded peptides L Cassidy, PT Kaulich, A Tholey Iscience 26 (2), 2023 | 10 | 2023 |
| MSTopDiff: A tool for the visualization of mass shifts in deconvoluted top-down proteomics data for the database-independent detection of protein modifications PT Kaulich, K Winkels, TB Kaulich, C Treitz, L Cassidy, A Tholey Journal of Proteome Research 21 (1), 20-29, 2021 | 8 | 2021 |
| Digital Microfluidics and Magnetic Bead‐Based Intact Proteoform Elution for Quantitative Top‐down Nanoproteomics of Single C. elegans Nematodes J Leipert, PT Kaulich, MK Steinbach, B Steer, K Winkels, C Blurton, ... Angewandte Chemie International Edition 62 (28), e202301969, 2023 | 7 | 2023 |
| Identification of proteoforms by top‐down proteomics using two‐dimensional low/low pH reversed‐phase liquid chromatography‐mass spectrometry PT Kaulich, L Cassidy, A Tholey Proteomics 24 (3-4), 2200542, 2024 | 4 | 2024 |
| Validation of top-down proteomics data by bottom-up-based N-terminomics reveals pitfalls in top-down-based terminomics workflows K Winkels, T Koudelka, PT Kaulich, M Leippe, A Tholey Journal of Proteome Research 21 (9), 2185-2196, 2022 | 4 | 2022 |
| Influence of Different Sample Preparation Approaches on Proteoform Identification by Top-Down Proteomics O Kohlbacher, K Jeong, P Kaulich, A Tholey Research Square, 2024 | | 2024 |
| Influence of Different Sample Preparation Approaches on Proteoform Identification by Top-Down Proteomics A Tholey, P Kaulich, K Jeong, O Kohlbacher | | 2024 |
| GeLC‐FAIMS‐MS workflow for in‐depth middle‐down proteomics A Takemori, PT Kaulich, R Konno, Y Kawashima, Y Hamazaki, A Hoshino, ... Proteomics 24 (3-4), 2200431, 2024 | | 2024 |
| Precursor deconvolution error estimation: The missing puzzle piece in false discovery rate in top‐down proteomics K Jeong, PT Kaulich, W Jung, J Kim, A Tholey, O Kohlbacher Proteomics 24 (3-4), 2300068, 2024 | | 2024 |
| Elution von intakten Proteoformen von magnetischen Partikeln kombiniert mit digitaler Mikrofluidik für die quantitative Top‐down‐Nanoproteomik von einzelnen C. elegans‐Nematoden J Leipert, PT Kaulich, MK Steinbach, B Steer, K Winkels, C Blurton, ... Angewandte Chemie 135 (28), e202301969, 2023 | | 2023 |
| Development of Methodologies for the Proteoform-centric Analysis of Complex Proteomes P Kaulich | | 2023 |
| FLASHQuant: a fast algorithm for proteoform quantification in top-down proteomics J Kim, K Jeong, PT Kaulich, K Winkels, A Tholey, O Kohlbacher bioRxiv, 2023.11. 08.566181, 2023 | | 2023 |
