| Recurrent frameshift neoantigen vaccine elicits protective immunity with reduced tumor burden and improved overall survival in a Lynch syndrome mouse model J Gebert, O Gelincik, M Oezcan-Wahlbrink, JD Marshall, ... Gastroenterology 161 (4), 1288-1302. e13, 2021 | 84 | 2021 |
| A content-based literature recommendation system for datasets to improve data reusability–A case study on Gene Expression Omnibus (GEO) datasets BG Patra, V Maroufy, B Soltanalizadeh, N Deng, WJ Zheng, K Roberts, ... Journal of Biomedical Informatics 104, 103399, 2020 | 45 | 2020 |
| Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis G Chen, JC Ramírez, N Deng, X Qiu, C Wu, WJ Zheng, H Wu Database 2019, bay145, 2019 | 42 | 2019 |
| An animated landscape representation of CD4+ T‐cell differentiation, variability, and plasticity: Insights into the behavior of populations versus cells JA Rebhahn, N Deng, G Sharma, AM Livingstone, S Huang, TR Mosmann European journal of immunology 44 (8), 2216-2229, 2014 | 33 | 2014 |
| Cytokine diversity in the Th1-dominated human anti-influenza response caused by variable cytokine expression by Th1 cells, and a minor population of uncommitted IL-2+ IFNγ-Thpp … N Deng, JM Weaver, TR Mosmann PLoS One 9 (5), e95986, 2014 | 26 | 2014 |
| Comparative molecular genomic analyses of a spontaneous rhesus macaque model of mismatch repair-deficient colorectal cancer N Ozirmak Lermi, SB Gray, CM Bowen, L Reyes-Uribe, BK Dray, N Deng, ... PLoS genetics 18 (4), e1010163, 2022 | 12 | 2022 |
| Dynamic transcriptional signatures and network responses for clinical symptoms in influenza-infected human subjects using systems biology approaches P Linel, S Wu, N Deng, H Wu Journal of pharmacokinetics and pharmacodynamics 41, 509-521, 2014 | 12 | 2014 |
| Optimization of the cytokine secretion assay for human IL‐2 in single and combination assays N Deng, TR Mosmann Cytometry Part A 87 (8), 777-783, 2015 | 10 | 2015 |
| A novel group of genes that cause endocrine resistance in breast cancer identified by dynamic gene expression analysis A Asghari, K Wall, M Gill, N Del Vecchio, F Allahbakhsh, J Wu, N Deng, ... Oncotarget 13, 600, 2022 | 8 | 2022 |
| Recombinant hepatitis B large surface antigen, successfully produced in Escherichia coli, stimulates T-cell response in mice L Shu, N Touzjian, D Nan, N Kushner, AJ Strong, W Zeping, G Zhaohui, ... Vaccine 24 (20), 4409-4416, 2006 | 7 | 2006 |
| An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries BG Patra, B Soltanalizadeh, N Deng, L Wu, V Maroufy, C Wu, WJ Zheng, ... Database 2020, baaa074, 2020 | 6 | 2020 |
| ImmuneData: an integrated data discovery system for immunology data repositories N Deng, C Wu, A Yaseen, H Wu Database 2022, baac003, 2022 | 5 | 2022 |
| Exercise Training Reduces the Inflammatory Response and Promotes Intestinal Mucosa-Associated Immunity in Lynch Syndrome N Deng, L Reyes-Uribe, JF Fahrmann, WS Thoman, MF Munsell, ... Clinical Cancer Research 29 (21), 4361-4372, 2023 | 4 | 2023 |
| Human intestinal organoids from Cronkhite-Canada syndrome patients reveal link between serotonin and proliferation V Poplaski, C Bomidi, A Kambal, H Nguyen-Phuc, SC Di Rienzi, ... Journal of Clinical Investigation 133 (21), e166884, 2023 | 3 | 2023 |
| Gene expression dynamic analysis reveals co-activation of Sonic Hedgehog and epidermal growth factor followed by dynamic silencing V Maroufy, P Shah, A Asghari, N Deng, RNU Le, JC Ramirez, A Yaseen, ... Oncotarget 11 (15), 1358, 2020 | 3 | 2020 |
| Construction of RNAi binary vector of soybean receptor-like kinase gene (rlpk2) and its soybean transformation XP Li, N Deng, YY Ma, PL Li, Y Wang, R Zhang, NN Wang Fen zi xi bao Sheng wu xue bao= Journal of Molecular Cell Biology 39 (1), 1-8, 2006 | 3 | 2006 |
| Genomic landscape of lynch syndrome colorectal neoplasia identifies shared mutated neoantigens for immunoprevention AM Bolivar, F Duzagac, N Deng, L Reyes-Uribe, K Chang, W Wu, ... Gastroenterology 166 (5), 787-801. e11, 2024 | 2 | 2024 |
| Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of … N Deng, JC Ramirez, M Carey, H Miao, CA Arias, AP Rice, H Wu Infectious Disease Modelling 4, 215-226, 2019 | 2 | 2019 |
| Naproxen chemoprevention induces proliferation of cytotoxic lymphocytes in Lynch Syndrome colorectal mucosa CM Bowen, N Deng, L Reyes-Uribe, ER Parra, P Rocha, LM Solis, ... Frontiers in immunology 14, 1162669, 2023 | 1 | 2023 |
| MONET: a database for prediction of neoantigens derived from microsatellite loci N Deng, KM Sinha, E Vilar Frontiers in Immunology 15, 1394593, 2024 | | 2024 |
