| A dynamic programming algorithm for RNA structure prediction including pseudoknots E Rivas, SR Eddy Journal of molecular biology 285 (5), 2053-2068, 1999 | 1027 | 1999 |
| Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families I Kalvari, J Argasinska, N Quinones-Olvera, EP Nawrocki, E Rivas, ... Nucleic acids research 46 (D1), D335-D342, 2018 | 919 | 2018 |
| Noncoding RNA gene detection using comparative sequence analysis E Rivas, SR Eddy BMC bioinformatics 2, 1-19, 2001 | 669 | 2001 |
| Rfam 14: expanded coverage of metagenomic, viral and microRNA families I Kalvari, EP Nawrocki, N Ontiveros-Palacios, J Argasinska, K Lamkiewicz, ... Nucleic Acids Research 49 (D1), D192-D200, 2021 | 594 | 2021 |
| Computational identification of noncoding RNAs in E. coli by comparative genomics E Rivas, RJ Klein, TA Jones, SR Eddy Current biology 11 (17), 1369-1373, 2001 | 562 | 2001 |
| Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs E Rivas, SR Eddy Bioinformatics 16 (7), 583-605, 2000 | 397 | 2000 |
| Location theory W Alonso Regional development and planning, 78-106, 1964 | 326 | 1964 |
| A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs E Rivas, J Clements, SR Eddy Nature methods 14 (1), 45-48, 2017 | 318 | 2017 |
| The language of RNA: a formal grammar that includes pseudoknots E Rivas, SR Eddy Bioinformatics 16 (4), 334-340, 2000 | 253 | 2000 |
| RNAcentral: a hub of information for non-coding RNA sequences Nucleic Acids Research 47 (D1), D221-D229, 2019 | 233 | 2019 |
| A range of complex probabilistic models for RNA secondary structure prediction that includes the nearest-neighbor model and more E Rivas, R Lang, SR Eddy RNA 18 (2), 193-212, 2012 | 133 | 2012 |
| Identification of differentially expressed small non‐coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics C Del Val, E Rivas, O Torres‐Quesada, N Toro, JI Jiménez‐Zurdo Molecular microbiology 66 (5), 1080-1091, 2007 | 130 | 2007 |
| Evolutionary models for insertions and deletions in a probabilistic modeling framework E Rivas BMC bioinformatics 6, 1-30, 2005 | 79 | 2005 |
| Probabilistic phylogenetic inference with insertions and deletions E Rivas, SR Eddy PLoS computational biology 4 (9), e1000172, 2008 | 78 | 2008 |
| Estimating the power of sequence covariation for detecting conserved RNA structure E Rivas, J Clements, SR Eddy Bioinformatics 36 (10), 3072-3076, 2020 | 75 | 2020 |
| RNA structure prediction using positive and negative evolutionary information E Rivas PLoS computational biology 16 (10), e1008387, 2020 | 65 | 2020 |
| The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective E Rivas RNA biology 10 (7), 1185-1196, 2013 | 62 | 2013 |
| Absence of chiral fermions in the Eichten-Preskill model MFL Golterman, DN Petcher, E Rivas Nuclear Physics B 395 (3), 596-622, 1993 | 53 | 1993 |
| Evolutionary conservation of RNA sequence and structure E Rivas Wiley Interdisciplinary Reviews: RNA 12 (5), e1649, 2021 | 49 | 2021 |
| Parameterizing sequence alignment with an explicit evolutionary model E Rivas, SR Eddy BMC bioinformatics 16, 1-23, 2015 | 32 | 2015 |
Sean R. EddyHHMI & Harvard University在 fas.harvard.edu 的电子邮件经过验证
