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Chao Cheng
Chao Cheng
在 bcm.edu 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
140062012
Architecture of the human regulatory network derived from ENCODE data
MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ...
Nature 489 (7414), 91-100, 2012
16532012
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
14492011
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ...
Science 330 (6012), 1775, 2010
11052010
A cis-regulatory map of the Drosophila genome
N Nègre, CD Brown, L Ma, CA Bristow, SW Miller, U Wagner, ...
Nature 471 (7339), 527-531, 2011
5762011
Life span extension by calorie restriction depends on Rim15 and transcription factors downstream of Ras/PKA, Tor, and Sch9
M Wei, P Fabrizio, J Hu, H Ge, C Cheng, L Li, VD Longo
PLoS Genetics 4 (1), e13, 2008
5672008
Sir2 blocks extreme life-span extension
P Fabrizio, C Gattazzo, L Battistella, M Wei, C Cheng, K McGrew, ...
Cell 123 (4), 655-667, 2005
4882005
CircNet: a database of circular RNAs derived from transcriptome sequencing data
YC Liu, JR Li, CH Sun, E Andrews, RF Chao, FM Lin, SL Weng, SD Hsu, ...
Nucleic Acids Res., pii: gkv940, 2015
3422015
Comparative analysis of the transcriptome across distant species
M Gerstein, J Rozowsky, K Yan, D Wang, C Cheng, B Brown, C Davis, ...
Nature 512, 445–448, 2014
3292014
Modeling gene expression using chromatin features in various cellular contexts
X Dong, MC Greven, A Kundaje, S Djebali, JB Brown, C Cheng, ...
Genome biology 13, 1-17, 2012
3242012
Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors
KY Yip, C Cheng, N Bhardwaj, JB Brown, J Leng, A Kundaje, J Rozowsky, ...
Genome biology 13, 1-22, 2012
2982012
A deep learning framework for modeling structural features of RNA-binding protein targets
S Zhang, J Zhou, H H, H Gong, L Chen, C Cheng, J Zeng
Nucleic Acids Res., gkv1025, 2015
2952015
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans.
W Niu, ZJ Lu, M Zhong, M Sarov, JI Murray, CM Brdlik, J Janette, C Cheng, ...
Genome Res. 21 (2), 245-254, 2011
2602011
Big data bioinformatics
C Greene, J Tan, M Ung, J Moore, C Cheng
J. Cell. Physiol., 2014
2592014
Comparative analysis of regulatory information and circuits across diverse species
A Boyle, C Araya, C Brdlik, P Cayting, C Cheng, Y Cheng, K Gardner, ...
Nature 512, 453–456, 2014
2282014
Reconstruction of enhancer–target networks in 935 samples of human primary cells, tissues and cell lines
Q Cao, C Anyansi, X Hu, L Xu, L Xiong, W Tang, MTS Mok, C Cheng, ...
Nature genetics 49 (10), 1428-1436, 2017
2142017
Immunoregulatory functions of VISTA
EC Nowak, JL Lines, FS Varn, J Deng, A Sarde, R Mabaera, A Kuta, ...
Immunological reviews 276 (1), 66-79, 2017
2042017
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
C Cheng, R Alexander, R Min, J Leng, KY Yip, J Rozowsky, KK Yan, ...
Genome Research 22 (9), 1658-1667, 2012
1992012
Identification of cell cycle–regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors
GD Grant, L Brooks 3rd, X Zhang, JM Mahoney, V Martyanov, TA Wood, ...
Molecular biology of the cell 24 (23), 3634-3650, 2013
1962013
VISTA is a checkpoint regulator for naïve T cell quiescence and peripheral tolerance
MA ElTanbouly, Y Zhao, E Nowak, J Li, E Schaafsma, I Le Mercier, ...
Science 367 (6475), eaay0524, 2020
1872020
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