Pre-calculated protein structure alignments at the RCSB PDB website A Prlić, S Bliven, PW Rose, WF Bluhm, C Bizon, A Godzik, PE Bourne Bioinformatics 26 (23), 2983-2985, 2010 | 243 | 2010 |
BioJava: an open-source framework for bioinformatics in 2012 A Prlić, A Yates, SE Bliven, PW Rose, J Jacobsen, PV Troshin, ... Bioinformatics 28 (20), 2693-2695, 2012 | 221 | 2012 |
Determining cysteines available for covalent inhibition across the human kinome Z Zhao, Q Liu, S Bliven, L Xie, PE Bourne Journal of medicinal chemistry 60 (7), 2879-2889, 2017 | 125 | 2017 |
Structure of the Full-length VEGFR-1 Extracellular Domain in Complex with VEGF-A S Markovic-Mueller, E Stuttfeld, M Asthana, T Weinert, S Bliven, ... Structure 25 (2), 341-352, 2017 | 100 | 2017 |
Circular permutation in proteins S Bliven, A Prlić PLoS computational biology 8 (3), e1002445, 2012 | 86 | 2012 |
Automated evaluation of quaternary structures from protein crystals S Bliven, A Lafita, A Parker, G Capitani, JM Duarte PLoS computational biology 14 (4), e1006104, 2018 | 75 | 2018 |
A PDB-wide, evolution-based assessment of protein-protein interfaces K Baskaran, JM Duarte, N Biyani, S Bliven, G Capitani BMC structural biology 14, 1-11, 2014 | 66 | 2014 |
Assessment of protein assembly prediction in CASP12 A Lafita, S Bliven, A Kryshtafovych, M Bertoni, B Monastyrskyy, JM Duarte, ... Proteins: Structure, Function, and Bioinformatics 86, 247-256, 2018 | 60 | 2018 |
Systems biology of the structural proteome E Brunk, N Mih, J Monk, Z Zhang, EJ O’Brien, SE Bliven, K Chen, ... BMC systems biology 10, 1-16, 2016 | 60 | 2016 |
Systematic detection of internal symmetry in proteins using CE-Symm D Myers-Turnbull, SE Bliven, PW Rose, ZK Aziz, P Youkharibache, ... Journal of molecular biology 426 (11), 2255-2268, 2014 | 52 | 2014 |
BioJava 5: A community driven open-source bioinformatics library A Lafita, S Bliven, A Prlić, D Guzenko, PW Rose, A Bradley, P Pavan, ... PLoS computational biology 15 (2), e1006791, 2019 | 46 | 2019 |
Determining crystal structures through crowdsourcing and coursework S Horowitz, B Koepnick, R Martin, A Tymieniecki, AA Winburn, S Cooper, ... Nature communications 7 (1), 12549, 2016 | 44 | 2016 |
Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts G Capitani, JM Duarte, K Baskaran, S Bliven, JC Somody Bioinformatics 32 (4), 481-489, 2016 | 40 | 2016 |
Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm SE Bliven, A Lafita, PW Rose, G Capitani, A Prlić, PE Bourne PLoS computational biology 15 (4), e1006842, 2019 | 27 | 2019 |
Detection of circular permutations within protein structures using CE-CP SE Bliven, PE Bourne, A Prlić Bioinformatics 31 (8), 1316-1318, 2015 | 18 | 2015 |
Biological and functional relevance of CASP predictions T Liu, S Ish‐Shalom, W Torng, A Lafita, C Bock, M Mort, DN Cooper, ... Proteins: Structure, Function, and Bioinformatics 86, 374-386, 2018 | 13 | 2018 |
TRAL 2.0: tandem repeat detection with circular profile hidden Markov models and evolutionary aligner M Delucchi, P Näf, S Bliven, M Anisimova Frontiers in Bioinformatics 1, 691865, 2021 | 11 | 2021 |
Molql: towards a common general purpose molecular query language AS Rose, D Sehnal, S Bliven, SK Burley, S Velankar Biophysical Journal 114 (3), 342a, 2018 | 4 | 2018 |
Low-pass spectral analysis of time-resolved serial femtosecond crystallography data CM Casadei, A Hosseinizadeh, S Bliven, T Weinert, J Standfuss, R Fung, ... Structural Dynamics 10 (3), 2023 | 2 | 2023 |
Automated evaluation of quaternary structures from protein crystal structures JM Duarte, S Bliven, A Lafita, G Capitani, SK Burley Acta Crystallogr. Sect. A Found. Adv 73, a117, 2017 | 2 | 2017 |