Computational drug repositioning through heterogeneous network clustering C Wu, RC Gudivada, BJ Aronow, AG Jegga BMC systems biology 7, 1-9, 2013 | 162 | 2013 |
Automated clinical exome reanalysis reveals novel diagnoses SW Baker, JR Murrell, AI Nesbitt, KB Pechter, J Balciuniene, X Zhao, Z Yu, ... The Journal of Molecular Diagnostics 21 (1), 38-48, 2019 | 87 | 2019 |
Phen2Gene: rapid phenotype-driven gene prioritization for rare diseases M Zhao, JM Havrilla, L Fang, Y Chen, J Peng, C Liu, C Wu, M Sarmady, ... NAR genomics and Bioinformatics 2 (2), lqaa032, 2020 | 63 | 2020 |
Novel findings with reassessment of exome data: implications for validation testing and interpretation of genomic data KMD Gibson, A Nesbitt, K Cao, Z Yu, E Denenberg, E DeChene, Q Guan, ... Genetics in Medicine 20 (3), 329-336, 2018 | 35 | 2018 |
ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context C Wu, EE Bardes, AG Jegga, BJ Aronow Nucleic acids research 42 (W1), W107-W113, 2014 | 26 | 2014 |
Rapid and accurate interpretation of clinical exomes using Phenoxome: a computational phenotype-driven approach C Wu, B Devkota, P Evans, X Zhao, SW Baker, R Niazi, K Cao, ... European Journal of Human Genetics 27 (4), 612-620, 2019 | 24 | 2019 |
A comparison of survival analysis methods for cancer gene expression RNA-Sequencing data P Raman, S Zimmerman, KS Rathi, L de Torrenté, M Sarmady, C Wu, ... Cancer genetics 235, 1-12, 2019 | 23 | 2019 |
Genetic variant pathogenicity prediction trained using disease-specific clinical sequencing data sets P Evans, C Wu, A Lindy, DA McKnight, M Lebo, M Sarmady, ... Genome research 29 (7), 1144-1151, 2019 | 22 | 2019 |
Computational approaches for human disease gene prediction and ranking C Zhu, C Wu, BJ Aronow, AG Jegga Systems Analysis of Human Multigene Disorders, 69-84, 2013 | 22 | 2013 |
Using Machine Learning to Identify True Somatic Variants from Next-Generation Sequencing C Wu, X Zhao, M Welsh, K Costello, K Cao, AA Tayoun, M Li, M Sarmady Clinical Chemistry, 2019 | 14 | 2019 |
Growth in Children with a Fontan Circulation EE Mancilla, B Zielonka, JD Roizen, KM Dodds, EB Rand, JR Heimall, ... The Journal of Pediatrics, 2021 | 12 | 2021 |
Molecular diagnostic outcomes from 700 cases: What can we learn from a retrospective analysis of clinical exome sequencing? JR Murrell, AMI Nesbitt, SW Baker, KB Pechter, J Balciuniene, X Zhao, ... The Journal of Molecular Diagnostics 24 (3), 274-286, 2022 | 9 | 2022 |
Leveraging machine learning to identify acute myeloid leukemia patients and their chemotherapy regimens in an administrative database L Cao, YS Huang, C Wu, K Getz, TP Miller, J Ruiz, BT Fisher, AE Seif, ... Pediatric blood & cancer 70 (5), e30260, 2023 | 4 | 2023 |
Network biology methods for drug repositioning C Zhu, C Wu, AG Jegga Post-Genomic Approaches in Drug and Vaccine Development, 115-131, 2022 | 4 | 2022 |
AnthOligo: Automating the design of oligonucleotides for capture/enrichment technologies P Jayaraman, T Mosbruger, T Hu, NG Tairis, C Wu, PM Clark, M D'Arcy, ... Bioinformatics, 1367-4803, 2020 | 4 | 2020 |
A Biclustering algorithm to discover functional modules from ENCODE ChIP-Seq data C Wu, A Bakshi, B Aronow, A Jegga, R Bhatnagar 2013 IEEE 13th International Conference on Data Mining Workshops, 96-103, 2013 | 4 | 2013 |
Integrative literature and data mining to rank disease candidate genes C Wu, C Zhu, AG Jegga Biomedical Literature Mining, 207-226, 2014 | 2 | 2014 |
Clinical significance of serial tumor next generation sequencing (NGS) in 155 pediatric cancer patients. X Zhao, MM Li, J Schubert, J Wu, F Lin, GB Wertheim, L Surrey, M Luo, ... Journal of Clinical Oncology 38 (15_suppl), e13666-e13666, 2020 | 1 | 2020 |
Evolution of a clinical exome sequencing bioinformatics pipeline in pediatrics: improvements, validation, challenges C Wu, K Cao, P Jayaraman, LK Conlin, M Luo, MC Duhk, Z Yu, ... JOURNAL OF MOLECULAR DIAGNOSTICS 18 (6), 993-993, 2016 | 1 | 2016 |
Intelligent Data Mining on Large-scale Heterogeneous Datasets and its Application in Computational Biology C Wu University of Cincinnati, 2014 | 1 | 2014 |