Opportunities and obstacles for deep learning in biology and medicine T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ... Journal of The Royal Society Interface 15 (141), 2018 | 2044 | 2018 |
Albumentations: fast and flexible image augmentations A Buslaev, VI Iglovikov, E Khvedchenya, A Parinov, M Druzhinin, ... Information 11 (2), 125, 2020 | 2042 | 2020 |
Automatic Instrument Segmentation in Robot-Assisted Surgery Using Deep Learning A Shvets, A Rakhlin, AA Kalinin, V Iglovikov 2018 17th IEEE International Conference on Machine Learning and Applications …, 2018 | 407 | 2018 |
Deep convolutional neural networks for breast cancer histology image analysis A Rakhlin, A Shvets, V Iglovikov, AA Kalinin Image Analysis and Recognition: 15th International Conference, ICIAR 2018 …, 2018 | 388 | 2018 |
Paediatric Bone Age Assessment Using Deep Convolutional Neural Networks VI Iglovikov, A Rakhlin, AA Kalinin, AA Shvets Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical …, 2018 | 238 | 2018 |
Model-based and model-free machine learning techniques for diagnostic prediction and classification of clinical outcomes in Parkinson’s disease C Gao, H Sun, T Wang, M Tang, NI Bohnen, MLTM Müller, T Herman, ... Scientific reports 8 (1), 7129, 2018 | 182 | 2018 |
Deep Learning for Automatic Pneumonia Detection T Gabruseva, D Poplavskiy, A Kalinin Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2020 | 138 | 2020 |
Individual and cohort pharmacological phenotype prediction platform BD Athey, A Allyn-Feuer, GA Higgins, JS Burns, A Kalinin, B Pauls, A Ade, ... US Patent 10,867,702, 2020 | 136 | 2020 |
Deep learning in pharmacogenomics: from gene regulation to patient stratification AA Kalinin, GA Higgins, N Reamaroon, S Soroushmehr, A Allyn-Feuer, ... Pharmacogenomics 19 (7), 629-650, 2018 | 135 | 2018 |
Angiodysplasia Detection and Localization Using Deep Convolutional Neural Networks A Shvets, V Iglovikov, A Rakhlin, AA Kalinin 2018 17th IEEE International Conference on Machine Learning and Applications …, 2018 | 94 | 2018 |
Fixed-point convolutional neural network for real-time video processing in FPGA R Solovyev, A Kustov, D Telpukhov, V Rukhlov, A Kalinin 2019 IEEE Conference of Russian Young Researchers in Electrical and …, 2019 | 79* | 2019 |
3D convolutional neural networks for stalled brain capillary detection R Solovyev, AA Kalinin, T Gabruseva Computers in Biology and Medicine 141, 105089, 2022 | 60 | 2022 |
Medical image segmentation using deep neural networks with pre-trained encoders AA Kalinin, VI Iglovikov, A Rakhlin, AA Shvets Deep Learning Applications, 39-52, 2020 | 56 | 2020 |
SOCR data dashboard: an integrated big data archive mashing medicare, labor, census and econometric information SS Husain, A Kalinin, A Truong, ID Dinov Journal of big data 2, 1-18, 2015 | 40 | 2015 |
Three million images and morphological profiles of cells treated with matched chemical and genetic perturbations SN Chandrasekaran, BA Cimini, A Goodale, L Miller, M Kost-Alimova, ... Nature Methods, 2024 | 37 | 2024 |
3D Shape Modeling for Cell Nuclear Morphological Analysis and Classification AA Kalinin, A Allyn-Feuer, A Ade, GV Fon, W Meixner, D Dilworth, ... Scientific reports 8, 2018 | 36 | 2018 |
Model-Based and Model-Free Techniques for Amyotrophic Lateral Sclerosis Diagnostic Prediction and Patient Clustering M Tang, C Gao, SA Goutman, A Kalinin, B Mukherjee, Y Guan, ID Dinov Neuroinformatics, 1-15, 2019 | 34 | 2019 |
Ten quick tips for deep learning in biology BD Lee, A Gitter, CS Greene, S Raschka, F Maguire, AJ Titus, MD Kessler, ... PLoS computational biology 18 (3), e1009803, 2022 | 27 | 2022 |
Breast Tumor Cellularity Assessment using Deep Neural Networks A Rakhlin, A Tiulpin, AA Shvets, AA Kalinin, VI Iglovikov, S Nikolenko Proceedings of the IEEE International Conference on Computer Vision …, 2019 | 27 | 2019 |
3D cell nuclear morphology: microscopy imaging dataset and voxel-based morphometry classification results AA Kalinin, A Allyn-Feuer, A Ade, GV Fon, W Meixner, D Dilworth, ... 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition …, 2018 | 25 | 2018 |