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Ivan Berest
Ivan Berest
Bioinformatician, ETH Zürich
在 biol.ethz.ch 的电子邮件经过验证
标题
引用次数
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Integrative single-cell RNA-seq and ATAC-seq analysis of human developmental hematopoiesis
AM Ranzoni, A Tangherloni, I Berest, SG Riva, B Myers, PM Strzelecka, ...
Cell stem cell 28 (3), 472-487. e7, 2021
2462021
Quantification of differential transcription factor activity and multiomics-based classification into activators and repressors: diffTF
I Berest, C Arnold, A Reyes-Palomares, G Palla, KD Rasmussen, H Giles, ...
Cell reports 29 (10), 3147-3159. e12, 2019
1092019
Expression of galectin-1 in malignant tumors
D Demydenko, I Berest
Experimental oncology, 2009
992009
TET2 binding to enhancers facilitates transcription factor recruitment in hematopoietic cells
KD Rasmussen, I Berest, S Keβler, K Nishimura, L Simón-Carrasco, ...
Genome research 29 (4), 564-575, 2019
802019
Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension
A Reyes-Palomares, M Gu, F Grubert, I Berest, S Sa, M Kasowski, ...
Nature communications 11 (1), 1673, 2020
642020
Drug‐microenvironment perturbations reveal resistance mechanisms and prognostic subgroups in CLL
PM Bruch, HAR Giles, C Kolb, SA Herbst, T Becirovic, T Roider, J Lu, ...
Molecular Systems Biology 18 (8), e10855, 2022
112022
Integration of scATAC-Seq with scRNA-Seq data
I Berest, A Tangherloni
Single Cell Transcriptomics: Methods and Protocols, 293-310, 2022
62022
Enhancer-priming in ageing human bone marrow mesenchymal stromal cells contributes to immune traits
MC Lai, M Ruiz-Velasco, C Arnold, O Sigalova, D Bunina, I Berest, X Ding, ...
BioRxiv, 2021.09. 03.458728, 2021
52021
Tuft cell IL-17RB restrains IL-25 bioavailability and reveals context-dependent ILC2 hypoproliferation
X Feng, T Andersson, J Gschwend, P Flüchter, I Berest, JL Muff, ...
bioRxiv, 2024.03. 04.583299, 2024
2024
A computational multiomics method for quantifying activity and regulatory mode of transcription factors and its application in leukemia
I Berest
2020
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