Spatial organization of bacterial populations in response to oxygen and carbon counter-gradients in pore networks B Borer, R Tecon, D Or Nature communications 9 (1), 769, 2018 | 140 | 2018 |
Modeling metabolic networks of individual bacterial agents in heterogeneous and dynamic soil habitats (IndiMeSH) B Borer, M Ataman, V Hatzimanikatis, D Or PLoS computational biology 15 (6), e1007127, 2019 | 49 | 2019 |
The engineering of spatially linked microbial consortia–potential and perspectives SB Said, R Tecon, B Borer, D Or Current opinion in biotechnology 62, 137-145, 2020 | 41 | 2020 |
Spatial organization in microbial range expansion emerges from trophic dependencies and successful lineages B Borer, D Ciccarese, D Johnson, D Or Communications biology 3 (1), 685, 2020 | 29 | 2020 |
Rare and localized events stabilize microbial community composition and patterns of spatial self-organization in a fluctuating environment D Ciccarese, G Micali, B Borer, C Ruan, D Or, DR Johnson The ISME Journal 16 (5), 1453-1463, 2022 | 21 | 2022 |
Porous marine snow differentially benefits chemotactic, motile, and nonmotile bacteria B Borer, IH Zhang, AE Baker, GA O'Toole, AR Babbin PNAS nexus 2 (2), pgac311, 2023 | 11 | 2023 |
Spatiotemporal metabolic modeling of bacterial life in complex habitats B Borer, D Or Current Opinion in Biotechnology 67, 65-71, 2021 | 9 | 2021 |
Primary carbon sources and self-induced metabolic landscapes shape community structure in soil bacterial hotspots B Borer, H Kleyer, D Or Soil Biology and Biochemistry 168, 108620, 2022 | 7 | 2022 |
Bacterial age distribution in soil–Generational gaps in adjacent hot and cold spots B Borer, D Or PLOS Computational Biology 18 (2), e1009857, 2022 | 7 | 2022 |
Reduced gravity promotes bacterially mediated anoxic hotspots in unsaturated porous media B Borer, J Jimenez-Martinez, R Stocker, D Or Scientific reports 10 (1), 8614, 2020 | 6 | 2020 |
Evaporation-induced hydrodynamics control plasmid transfer during surface-associated microbial growth C Ruan, B Borer, J Ramoneda, G Wang, DR Johnson npj Biofilms and Microbiomes 9 (1), 58, 2023 | 3 | 2023 |
The media composition as a crucial element in high-throughput metabolic network reconstruction B Borer, S Magnúsdóttir Interface Focus 13 (2), 20220070, 2023 | 1 | 2023 |
Physical structure and interstitial flows govern microbial life in microenvironments R Shen, B Borer, D Ciccarese, MM Salek, AR Babbin bioRxiv, 2023.09. 19.558408, 2023 | 1 | 2023 |
Spatial organization in microbial range expansion emerges from trophic dependencies and successful lineages: source code B Borer ETH Zurich, 2020 | 1 | 2020 |
Microscale advection governs microbial growth and oxygen consumption in macroporous aggregates R Shen, B Borer, D Ciccarese, MM Salek, AR Babbin Msphere 9 (4), e00185-24, 2024 | | 2024 |
Uncultivated DPANN archaea are ubiquitous inhabitants of global oxygen-deficient zones with diverse metabolic potential IH Zhang, B Borer, R Zhao, S Wilbert, DK Newman, AR Babbin Mbio, e02918-23, 2024 | | 2024 |
Microbially-mediated shallow calcium carbonate dissolution in marine snow particles: evidence from microfluidic stable isotope experiments B Borer, AV Subhas, MG Hayden, RJ Woosley, AR Babbin 2024 Ocean Sciences Meeting, 2024 | | 2024 |
Surprising Links between the Microgeography and Demography of “Immortal” Soil Bacteria D Or, S Bickel, B Borer AGU23, 2023 | | 2023 |
Apparent nitrous acid dissociation across environmentally relevant temperatures in freshwater and seawater B Borer, E Bi, R Woosley, A Babbin | | 2023 |
On the Microgeography and Demography of Soil Bacteria D Or, S Bickel, BA Borer ASA, CSSA, SSSA International Annual Meeting, 2023 | | 2023 |