AutoTutor: An intelligent tutoring system with mixed-initiative dialogue AC Graesser, P Chipman, BC Haynes, A Olney IEEE Transactions on Education 48 (4), 612-618, 2005 | 882 | 2005 |
Toward an Integrated Model of Capsule Regulation in Cryptococcus neoformans BC Haynes, ML Skowyra, SJ Spencer, SR Gish, M Williams, EP Held, ... PLoS pathogens 7 (12), e1002411, 2011 | 108 | 2011 |
Molecular classification of thyroid lesions by combined testing for miRNA gene expression and somatic gene alterations D Wylie, S Beaudenon‐Huibregtse, BC Haynes, TJ Giordano, E Labourier The Journal of Pathology: Clinical Research 2 (2), 93-103, 2016 | 59 | 2016 |
Mapping functional transcription factor networks from gene expression data BC Haynes, EJ Maier, MH Kramer, PI Wang, H Brown, MR Brent Genome research 23 (8), 1319-1328, 2013 | 59 | 2013 |
Emerging themes in cryptococcal capsule synthesis P Kumar, M Yang, BC Haynes, ML Skowyra, TL Doering Current opinion in structural biology 21 (5), 597-602, 2011 | 57 | 2011 |
Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation EJ Maier, BC Haynes, SR Gish, ZA Wang, ML Skowyra, AL Marulli, ... Genome research 25 (5), 690-700, 2015 | 56 | 2015 |
AutoTutor: A Cognitive System That Simulates a Tutor Through Mixed-Initiative Dialogue AC Graesser, A Olney, BC Haynes, P Chipman Cognitive Systems, 187-222, 2006 | 52 | 2006 |
Computational analysis reveals a key regulator of cryptococcal virulence and determinant of host response SR Gish, EJ Maier, BC Haynes, FH Santiago-Tirado, DL Srikanta, CZ Ma, ... MBio 7 (2), 10.1128/mbio. 00313-16, 2016 | 45 | 2016 |
Benchmarking regulatory network reconstruction with GRENDEL BC Haynes, MR Brent Bioinformatics 25 (6), 801-807, 2009 | 44 | 2009 |
An integrated next-generation sequencing system for analyzing DNA mutations, gene fusions, and RNA expression in lung cancer BC Haynes, RA Blidner, RD Cardwell, R Zeigler, S Gokul, JR Thibert, ... Translational Oncology 12 (6), 836-845, 2019 | 24 | 2019 |
Reduced DICER1 elicits an interferon response in endometrial cancer cells KB Chiappinelli, BC Haynes, MR Brent, PJ Goodfellow Molecular Cancer Research 10 (3), 316-325, 2012 | 22 | 2012 |
Multilaboratory assessment of a new reference material for quality assurance of cell-free tumor DNA measurements HJ He, EV Stein, Y Konigshofer, T Forbes, FL Tomson, R Garlick, ... The Journal of Molecular Diagnostics 21 (4), 658-676, 2019 | 20 | 2019 |
Design, optimization, and multisite evaluation of a targeted next-generation sequencing assay system for chimeric RNAs from gene fusions and exon-skipping events in non–small … RA Blidner, BC Haynes, S Hyter, S Schmitt, ZY Pessetto, AK Godwin, ... The Journal of Molecular Diagnostics 21 (2), 352-365, 2019 | 16 | 2019 |
Identification of the galactosyltransferase of Cryptococcus neoformans involved in the biosynthesis of basidiomycete-type glycosylinositolphosphoceramide T Wohlschlager, R Buser, ML Skowyra, BC Haynes, B Henrissat, ... Glycobiology 23 (11), 1210-1219, 2013 | 10 | 2013 |
Validation of fragile X screening in the newborn population using a fit-for-purpose FMR1 PCR assay system S Lee, JL Taylor, C Redmond, AG Hadd, JA Kemppainen, BC Haynes, ... The Journal of Molecular Diagnostics 22 (3), 346-354, 2020 | 9 | 2020 |
Choice of FFPE DNA isolation method affects both yield and functional quality and impacts variant calling by targeted NGS R Blidner, JR Plyler, J Kemppainen, BC Haynes, R Zeigler, A Hiddessen, ... published online Nov 5, 2015 | 5 | 2015 |
Integration of wet and dry bench processes optimizes targeted next-generation sequencing of low-quality and low-quantity tumor biopsies J Houghton, AG Hadd, R Zeigler, BC Haynes, GJ Latham Journal of Visualized Experiments: Jove, 2016 | 2 | 2016 |