A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density NM Pearce, T Krojer, AR Bradley, P Collins, RP Nowak, R Talon, ... Nature communications 8 (1), 15123, 2017 | 241 | 2017 |
SAbPred: a structure-based antibody prediction server J Dunbar, K Krawczyk, J Leem, C Marks, J Nowak, C Regep, G Georges, ... Nucleic acids research 44 (W1), W474-W478, 2016 | 197 | 2016 |
Observed antibody space: a resource for data mining next-generation sequencing of antibody repertoires A Kovaltsuk, J Leem, S Kelm, J Snowden, CM Deane, K Krawczyk The Journal of Immunology 201 (8), 2502-2509, 2018 | 189 | 2018 |
Computational approaches to therapeutic antibody design: established methods and emerging trends RA Norman, F Ambrosetti, AMJJ Bonvin, LJ Colwell, S Kelm, S Kumar, ... Briefings in bioinformatics 21 (5), 1549-1567, 2020 | 177 | 2020 |
MEDELLER: homology-based coordinate generation for membrane proteins S Kelm, J Shi, CM Deane Bioinformatics 26 (22), 2833-2840, 2010 | 123 | 2010 |
Sphinx: merging knowledge-based and ab initio approaches to improve protein loop prediction C Marks, J Nowak, S Klostermann, G Georges, J Dunbar, J Shi, S Kelm, ... Bioinformatics 33 (9), 1346-1353, 2017 | 68 | 2017 |
Memoir: template-based structure prediction for membrane proteins JP Ebejer, JR Hill, S Kelm, J Shi, CM Deane Nucleic acids research 41 (W1), W379-W383, 2013 | 54 | 2013 |
Length-independent structural similarities enrich the antibody CDR canonical class model J Nowak, T Baker, G Georges, S Kelm, S Klostermann, J Shi, S Sridharan, ... MAbs 8 (4), 751-760, 2016 | 52 | 2016 |
B-cell epitopes: Discontinuity and conformational analysis S Ferdous, S Kelm, TS Baker, J Shi, ACR Martin Molecular immunology 114, 643-650, 2019 | 46 | 2019 |
Crystal structure of dopamine D1 receptor in complex with G protein and a non-catechol agonist B Sun, D Feng, MLH Chu, I Fish, S Lovera, ZA Sands, S Kelm, A Valade, ... Nature communications 12 (1), 3305, 2021 | 44 | 2021 |
Structurally mapping antibody repertoires K Krawczyk, S Kelm, A Kovaltsuk, JD Galson, D Kelly, J Trück, C Regep, ... Frontiers in immunology 9, 1698, 2018 | 43 | 2018 |
Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice A Kovaltsuk, MIJ Raybould, WK Wong, C Marks, S Kelm, J Snowden, ... PLoS computational biology 16 (2), e1007636, 2020 | 36 | 2020 |
iMembrane: homology-based membrane-insertion of proteins S Kelm, J Shi, CM Deane Bioinformatics 25 (8), 1086-1088, 2009 | 34 | 2009 |
Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR D Stöppler, A Macpherson, S Smith-Penzel, N Basse, F Lecomte, ... PLoS biology 16 (5), e2006192, 2018 | 32 | 2018 |
Reconstruction of apo A2A receptor activation pathways reveal ligand-competent intermediates and state-dependent cholesterol hotspots S Lovera, A Cuzzolin, S Kelm, G De Fabritiis, ZA Sands Scientific Reports 9 (1), 14199, 2019 | 28 | 2019 |
Examining the conservation of kinks in alpha helices EC Law, HR Wilman, S Kelm, J Shi, CM Deane PloS one 11 (6), e0157553, 2016 | 27 | 2016 |
SCALOP: sequence-based antibody canonical loop structure annotation WK Wong, G Georges, F Ros, S Kelm, AP Lewis, B Taddese, J Leem, ... Bioinformatics 35 (10), 1774-1776, 2019 | 26 | 2019 |
Environment specific substitution tables improve membrane protein alignment JR Hill, S Kelm, J Shi, CM Deane Bioinformatics 27 (13), i15-i23, 2011 | 23 | 2011 |
Electrostatic interactions modulate the differential aggregation propensities of IgG1 and IgG4P antibodies and inform charged residue substitutions for improved developability JT Heads, R Lamb, S Kelm, R Adams, P Elliott, K Tyson, S Topia, S West, ... Protein Engineering, Design and Selection 32 (6), 277-288, 2019 | 21 | 2019 |
Fragment‐based modeling of membrane protein loops: Successes, failures, and prospects for the future S Kelm, A Vangone, Y Choi, JP Ebejer, J Shi, CM Deane Proteins: Structure, Function, and Bioinformatics 82 (2), 175-186, 2014 | 14 | 2014 |