| Multimodal deep learning for biomedical data fusion: a review SR Stahlschmidt, B Ulfenborg, J Synnergren Briefings in Bioinformatics 23 (1), 2022 | 244 | 2022 |
| Vertical and horizontal integration of multi-omics data with miodin B Ulfenborg BMC bioinformatics 20, 1-10, 2019 | 61 | 2019 |
| Consideration should be given to smoking, endometriosis, renal function (eGFR) and age when interpreting CA125 and HE4 in ovarian tumor diagnostics M Lycke, B Ulfenborg, J Malchau Lauesgaard, B Kristjansdottir, ... Clinical Chemistry and Laboratory Medicine (CCLM) 59 (12), 1954-1962, 2021 | 27 | 2021 |
| Cardiac hypertrophy in a dish: A human stem cell based model M Johansson, B Ulfenborg, CX Andersson, S Heydarkhan-Hagvall, ... Biology open 9 (9), bio052381, 2020 | 23 | 2020 |
| Characterization of human induced pluripotent stem cell-derived hepatocytes with mature features and potential for modeling metabolic diseases G Holmgren, B Ulfenborg, A Asplund, K Toet, CX Andersson, ... International Journal of Molecular Sciences 21 (2), 469, 2020 | 21 | 2020 |
| Univariate and classification analysis reveals potential diagnostic biomarkers for early stage ovarian cancer Type 1 and Type 2 S Marcišauskas, B Ulfenborg, B Kristjansdottir, S Waldemarson, ... Journal of proteomics 196, 57-68, 2019 | 16 | 2019 |
| Comparative transcriptomics of hepatic differentiation of human pluripotent stem cells and adult human liver tissue N Ghosheh, B Küppers-Munther, A Asplund, J Edsbagge, B Ulfenborg, ... Physiological genomics 49 (8), 430-446, 2017 | 15 | 2017 |
| Bioinformatics tools for discovery and evaluation of biomarkers: applications in clinical assessment of cancer B Ulfenborg Örebro university, 2016 | 15 | 2016 |
| Increased diagnostic accuracy of adnexal tumors with a combination of established algorithms and biomarkers M Lycke, B Ulfenborg, B Kristjansdottir, K Sundfeldt Journal of Clinical Medicine 9 (2), 299, 2020 | 13 | 2020 |
| A data analysis framework for biomedical big data: Application on mesoderm differentiation of human pluripotent stem cells B Ulfenborg, A Karlsson, M Riveiro, C Améen, K Åkesson, CX Andersson, ... Plos one 12 (6), e0179613, 2017 | 11 | 2017 |
| miREC: a database of miRNAs involved in the development of endometrial cancer B Ulfenborg, S Jurcevic, A Lindlöf, K Klinga-Levan, B Olsson BMC research notes 8, 1-9, 2015 | 11 | 2015 |
| Classification of tumor samples from expression data using decision trunks B Ulfenborg, K Klinga-Levan, B Olsson Cancer informatics 12, CIN. S10356, 2013 | 10 | 2013 |
| Diagnostic potential of nanoparticle aided assays for MUC16 and MUC1 glycovariants in ovarian cancer S Jain, N Nadeem, B Ulfenborg, M Mäkelä, SA Ruma, J Terävä, ... International Journal of Cancer 151 (7), 1175-1184, 2022 | 8 | 2022 |
| Multi-omics characterization of a human stem cell-based model of cardiac hypertrophy M Johansson, B Ulfenborg, CX Andersson, S Heydarkhan-Hagvall, ... Life 12 (2), 293, 2022 | 6 | 2022 |
| Multi-assignment clustering: Machine learning from a biological perspective B Ulfenborg, A Karlsson, M Riveiro, CX Andersson, P Sartipy, ... Journal of biotechnology 326, 1-10, 2021 | 6 | 2021 |
| Characterization of methylation patterns associated with lifestyle factors and vitamin D supplementation in a healthy elderly cohort from Southwest Sweden MAD Cruz, B Ulfenborg, P Blomstrand, M Faresjö, F Ståhl, S Karlsson Scientific reports, 2022 | 4 | 2022 |
| Genomic alterations in ovarian endometriosis and subsequently diagnosed ovarian carcinoma A Linder, S Westbom-Fremer, C Mateoiu, A Olsson Widjaja, T Österlund, ... Human Reproduction 39 (5), 1141-1154, 2024 | 3 | 2024 |
| Artificial intelligence supports automated characterization of differentiated human pluripotent stem cells K Marzec-Schmidt, N Ghosheh, SR Stahlschmidt, B Küppers-Munther, ... Stem Cells 41 (9), 850-861, 2023 | 3 | 2023 |
| Human intracardiac SSEA4+ CD34 cells show features of cycling, immature cardiomyocytes and are distinct from Side Population and C-kit+ CD45-cells M Sandstedt, K Vukusic, B Ulfenborg, M Jonsson, L Mattsson Hultén, ... Plos one 17 (6), e0269985, 2022 | 3 | 2022 |
| Genome-wide discovery of miRNAs using ensembles of machine learning algorithms and logistic regression B Ulfenborg, K Klinga-Levan, B Olsson International Journal of Data Mining and Bioinformatics 13 (4), 338-359, 2015 | 3 | 2015 |
