| Network-based analysis of cognitive impairment and memory deficits from transcriptome data E Emanetci, T Çakır Journal of Molecular Neuroscience 71 (11), 2415-2428, 2021 | 5 | 2021 |
| A co‐expression network based molecular characterization of genes responsive for Braak stages in Parkinson's disease E Düz, T Çakır European Journal of Neuroscience 55 (7), 1873-1886, 2022 | 3 | 2022 |
| Personalized Protein-Protein Interaction Networks Towards Unraveling the Molecular Mechanisms of Alzheimer’s Disease B Ceylan, E Düz, T Çakir Molecular Neurobiology 61 (4), 2120-2135, 2024 | 2 | 2024 |
| Effect of RNA-Seq data normalization on protein interactome mapping for Alzheimer’s disease E Düz, T Çakır Computational Biology and Chemistry 109, 108028, 2024 | 2 | 2024 |
| Multilayer Analysis of RNA Sequencing Data in Alzheimer’s Disease to Unravel Molecular Mysteries D Uzuner, A İlgün, E Düz, FB Bozkurt, T Çakır Systems Neuroscience, 219-246, 2024 | | 2024 |
| A benchmark of RNA-seq data normalization methods for transcriptome mapping on human genome-scale metabolic networks HB Lüleci, D Uzuner, MF Cesur, A İlgün, E Düz, E Abdik, R Odongo, ... npj Systems Biology and Applications 10 (1), 124, 2024 | | 2024 |
| Personalized analysis of metabolic changes in Alzheimer's disease with a systems biology approach D Uzuner, EE Düz, FB Bozkurt, T Çakır 15th International Symposium on Health Informatics and Bioinformatics HIBIT …, 2022 | | 2022 |
| Analysis of cognitive impairment and memory disorders based on cellular networks using transcriptome data. E Emanetci, T Çakır Anatomy: International Journal of Experimental & Clinical Anatomy 13, 2019 | | 2019 |
| Integration of genomic and transcriptomic layers in RNA‐Seq data leads to protein interaction modules with improved Alzheimer's disease associations E Düz, A İlgün, FB Bozkurt, T Çakır European Journal of Neuroscience, 0 | | |
