Genetic analysis of the human microglial transcriptome across brain regions, aging and disease pathologies KP Lopes, GJL Snijders, J Humphrey, A Allan, MAM Sneeboer, E Navarro, ... Nature genetics 54 (1), 4-17, 2022 | 143 | 2022 |
Alignment modulates ancestral sequence reconstruction accuracy RA Vialle, AU Tamuri, N Goldman Molecular biology and evolution 35 (7), 1783-1797, 2018 | 69 | 2018 |
Whole genome sequencing of the Pirarucu (Arapaima gigas) supports independent emergence of major teleost clades RA Vialle, JES de Souza, K de Paiva Lopes, DG Teixeira, ... Genome Biology and Evolution, 2018 | 39 | 2018 |
Integrating whole-genome sequencing with multi-omic data reveals the impact of structural variants on gene regulation in the human brain RA Vialle, K de Paiva Lopes, DA Bennett, JF Crary, T Raj Nature Neuroscience 25 (4), 504-514, 2022 | 35 | 2022 |
Dysregulation of mitochondrial and proteolysosomal genes in Parkinson’s disease myeloid cells E Navarro, E Udine, KP Lopes, M Parks, G Riboldi, BM Schilder, ... Nature Aging 1 (9), 850-863, 2021 | 25* | 2021 |
Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage K de Paiva Lopes, T Vinasco-Sandoval, RA Vialle, FM Paschoal, ... Scientific Reports 8 (1), 8786, 2018 | 25 | 2018 |
Genome-wide association study and functional validation implicates JADE1 in tauopathy K Farrell, SH Kim, N Han, MA Iida, EM Gonzalez, M Otero-Garcia, ... Acta neuropathologica 143, 33-53, 2022 | 22 | 2022 |
Transcriptome deregulation of peripheral monocytes and whole blood in GBA-related Parkinson’s disease GM Riboldi, RA Vialle, E Navarro, E Udine, K de Paiva Lopes, ... Molecular Neurodegeneration 17 (1), 52, 2022 | 19 | 2022 |
RAFTS3: Rapid alignment-free tool for sequence similarity search RA Vialle, F Oliveira Pedrosa, VA Weiss, D Guizelini, JH Tibaes, ... BioRxiv, 055269, 2016 | 12 | 2016 |
Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water V de Souza, VC Piro, H Faoro, MZ Tadra-Sfeir, VK Chicora, D Guizelini, ... Genome announcements 1 (1), 10.1128/genomea. 00252-12, 2013 | 9 | 2013 |
Comprehensive analysis of germline mutations in northern Brazil: a panel of 16 genes for hereditary cancer-predisposing syndrome investigation AF Vidal, RS Ferraz, A El-Husny, CS Silva, T Vinasco-Sandoval, ... BMC cancer 21, 1-8, 2021 | 7 | 2021 |
Planktonic cyanobacteria from a tropical reservoir of southeastern Brazil: a picocyanobacteria rich community and new approaches for its characterization M Laux, VR Werner, RA Vialle, JM Ortega, A Giani Nova Hedwigia 107 (1-2), 229-256, 2018 | 7 | 2018 |
Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes K de Paiva Lopes, FJ Campos-Laborie, RA Vialle, JM Ortega, ... BMC genomics 17 (8), 725, 2016 | 7 | 2016 |
RAFTS 3 G: an efficient and versatile clustering software to analyses in large protein datasets BT de Lima Nichio, AMR De Oliveira, CR De Pierri, LGC Santos, ... BMC Bioinformatics 20 (1), 392, 2019 | 5 | 2019 |
BOWS (bioinformatics open web services) to centralize bioinformatics tools in web services H Velloso, RA Vialle, JM Ortega BMC research notes 8 (1), 206, 2015 | 5 | 2015 |
Role of miRNAs in Sigmoid Colon Cancer: A Search for Potential Biomarkers D Marques, LR Ferreira-Costa, LL Ferreira-Costa, AB Bezerra-Oliveira, ... Cancers 12 (11), 3311, 2020 | 4 | 2020 |
The human microglia responsome: a resource to better understand microglia states in health and disease G Snijders, K de Paiva Lopes, M Sneeboer, B Muller, F Gigase, R Vialle, ... bioRxiv, 2023.10. 12.562067, 2023 | 3 | 2023 |
Betacoronaviruses genome analysis reveals evolution toward specific codons usage: Implications for SARS‐CoV‐2 mitigation strategies EN Lopes, V Fonseca, D Frias, S Tosta, Á Salgado, R Assunção Vialle, ... Journal of medical virology 93 (9), 5630-5634, 2021 | 1 | 2021 |
G-protein coupled estrogen receptor 1, amyloid-β, and tau tangles in older adults S Oveisgharan, L Yu, K de Paiva Lopes, VA Petyuk, S Tasaki, R Vialle, ... Communications Biology 7 (1), 569, 2024 | | 2024 |
LRRK2 G2019S variant is associated with transcriptional changes in Parkinson's disease human myeloid cells under proinflammatory environment E Navarro, A Efthymiou, M Parks, G Riboldi, RA Vialle, B Muller, ... bioRxiv, 2024.05. 27.594821, 2024 | | 2024 |