| A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking R Daniels, SK Volkman, DA Milner, N Mahesh, DE Neafsey, DJ Park, ... Malaria journal 7, 1-11, 2008 | 255 | 2008 |
| Modeling malaria genomics reveals transmission decline and rebound in Senegal RF Daniels, SF Schaffner, EA Wenger, JL Proctor, HH Chang, W Wong, ... Proceedings of the National Academy of Sciences 112 (22), 7067-7072, 2015 | 195 | 2015 |
| Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparumpopulation divergence DE Neafsey, SF Schaffner, SK Volkman, D Park, P Montgomery, ... Genome biology 9, 1-16, 2008 | 149 | 2008 |
| Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia A Mukherjee, S Bopp, P Magistrado, W Wong, R Daniels, A Demas, ... Malaria journal 16, 1-12, 2017 | 132 | 2017 |
| Hybrid selection for sequencing pathogen genomes from clinical samples A Melnikov, K Galinsky, P Rogov, T Fennell, D Van Tyne, C Russ, ... Genome biology 12, 1-9, 2011 | 120 | 2011 |
| Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal R Daniels, HH Chang, PD Séne, DC Park, DE Neafsey, SF Schaffner, ... PloS one 8 (4), e60780, 2013 | 113 | 2013 |
| Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum D Van Tyne, DJ Park, SF Schaffner, DE Neafsey, E Angelino, JF Cortese, ... PLoS genetics 7 (4), e1001383, 2011 | 113 | 2011 |
| Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections ML Baniecki, AL Faust, SF Schaffner, DJ Park, K Galinsky, RF Daniels, ... PLoS neglected tropical diseases 9 (3), e0003539, 2015 | 99 | 2015 |
| Clonal Outbreak of Plasmodium falciparum Infection in Eastern Panama N Obaldia III, NK Baro, JE Calzada, AM Santamaria, R Daniels, W Wong, ... The Journal of infectious diseases 211 (7), 1087-1096, 2015 | 88 | 2015 |
| COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data K Galinsky, C Valim, A Salmier, B de Thoisy, L Musset, E Legrand, ... Malaria journal 14, 1-9, 2015 | 81 | 2015 |
| Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum R Daniels, D Ndiaye, M Wall, J McKinney, PD Séne, PC Sabeti, ... Antimicrobial agents and chemotherapy 56 (6), 2976-2986, 2012 | 72 | 2012 |
| Natural Products from isnA-Containing Biosynthetic Gene Clusters Recovered from the Genomes of Cultured and Uncultured Bacteria SF Brady, JD Bauer, MF Clarke-Pearson, R Daniels Journal of the American Chemical Society 129 (40), 12102-12103, 2007 | 61 | 2007 |
| Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal W Wong, AD Griggs, RF Daniels, SF Schaffner, D Ndiaye, AK Bei, ... Genome medicine 9, 1-12, 2017 | 55 | 2017 |
| Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing AM Early, RF Daniels, TM Farrell, J Grimsby, SK Volkman, DF Wirth, ... Malaria Journal 18, 1-13, 2019 | 51 | 2019 |
| Evidence of non-Plasmodium falciparum malaria infection in Kédougou, Sénégal RF Daniels, AB Deme, JF Gomis, B Dieye, K Durfee, JI Thwing, FB Fall, ... Malaria journal 16, 1-7, 2017 | 48 | 2017 |
| Persistence of Plasmodium falciparum parasitemia after artemisinin combination therapy: evidence from a randomized trial in Uganda HH Chang, E Meibalan, J Zelin, R Daniels, AC Eziefula, EC Meyer, ... Scientific Reports 6 (1), 26330, 2016 | 47 | 2016 |
| Molecular epidemiology of Plasmodium falciparum kelch13 mutations in Senegal determined by using targeted amplicon deep sequencing E Talundzic, YD Ndiaye, AB Deme, C Olsen, DS Patel, S Biliya, R Daniels, ... Antimicrobial agents and chemotherapy 61 (3), 10.1128/aac. 02116-16, 2017 | 45 | 2017 |
| Polymorphism in dhfr/dhps genes, parasite density and ex vivo response to pyrimethamine in Plasmodium falciparum malaria parasites in Thies, Senegal D Ndiaye, B Dieye, YD Ndiaye, D Van Tyne, R Daniels, AK Bei, A Mbaye, ... International Journal for Parasitology: Drugs and Drug Resistance 3, 135-142, 2013 | 41 | 2013 |
| Application of genomics to field investigations of malaria by the international centers of excellence for malaria research SK Volkman, D Ndiaye, M Diakite, OA Koita, D Nwakanma, RF Daniels, ... Acta tropica 121 (3), 324-332, 2012 | 38 | 2012 |
| Pre-amplification methods for tracking low-grade Plasmodium falciparum populations during scaled-up interventions in Southern Zambia S Mharakurwa, R Daniels, A Scott, DF Wirth, P Thuma, SK Volkman Malaria journal 13, 1-6, 2014 | 36 | 2014 |
