CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing TG Montague, JM Cruz, JA Gagnon, GM Church, E Valen Nucleic acids research 42 (W1), W401-W407, 2014 | 1285 | 2014 |
Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs JA Gagnon, E Valen, SB Thyme, P Huang, L Ahkmetova, A Pauli, ... PLoS One 9 (5), e98186, 2014 | 1003 | 2014 |
CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering K Labun, TG Montague, JA Gagnon, SB Thyme, E Valen Nucleic acids research 44 (W1), W272-W276, 2016 | 989 | 2016 |
Whole organism lineage tracing by combinatorial and cumulative genome editing A McKenna, G Findlay, JA Gagnon, M Horwitz, AF Schier, J Shendure Science 353 (6298), aaf7907, 2016 | 739 | 2016 |
Toddler: an embryonic signal that promotes cell movement via Apelin receptors A Pauli, ML Norris, E Valen, GL Chew, JA Gagnon, S Zimmerman, ... Science 343 (6172), 1248636, 2014 | 647 | 2014 |
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain B Raj, DE Wagner, A McKenna, S Pandey, AM Klein, J Shendure, ... Nature biotechnology 36 (5), 442-450, 2018 | 553 | 2018 |
Osteoblast differentiation and skeletal development are regulated by Mdm2–p53 signaling CJ Lengner, HA Steinman, J Gagnon, TW Smith, JE Henderson, ... The Journal of cell biology 172 (6), 909, 2006 | 305 | 2006 |
Efficient CRISPR-Cas9-mediated generation of knockin human pluripotent stem cells lacking undesired mutations at the targeted locus FT Merkle, WM Neuhausser, D Santos, E Valen, JA Gagnon, K Maas, ... Cell reports 11 (6), 875-883, 2015 | 194 | 2015 |
Recording development with single cell dynamic lineage tracing A McKenna, JA Gagnon Development 146 (12), dev169730, 2019 | 135 | 2019 |
Multiple Kinesin Motors Coordinate Cytoplasmic RNA Transport on a Subpopulation of Microtubules in Xenopus Oocytes TJ Messitt, JA Gagnon, JA Kreiling, CA Pratt, YJ Yoon, KL Mowry Developmental cell 15 (3), 426-436, 2008 | 132 | 2008 |
Expansion microscopy of zebrafish for neuroscience and developmental biology studies L Freifeld, I Odstrcil, D Förster, A Ramirez, JA Gagnon, O Randlett, ... Proceedings of the National Academy of Sciences 114 (50), E10799-E10808, 2017 | 109 | 2017 |
Molecular motors: directing traffic during RNA localization JA Gagnon, KL Mowry Critical reviews in biochemistry and molecular biology 46 (3), 229-239, 2011 | 93 | 2011 |
Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR–Cas9 barcodes by scGESTALT B Raj, JA Gagnon, AF Schier Nature protocols 13 (11), 2685-2713, 2018 | 70 | 2018 |
Evolutionarily conserved regulation of hypocretin neuron specification by Lhx9 J Liu, FT Merkle, AV Gandhi, JA Gagnon, IG Woods, CN Chiu, ... Development 142 (6), 1113-1124, 2015 | 65 | 2015 |
Zebrafish oxytocin neurons drive nocifensive behavior via brainstem premotor targets CL Wee, M Nikitchenko, WC Wang, SJ Luks-Morgan, E Song, JA Gagnon, ... Nature neuroscience 22 (9), 1477-1492, 2019 | 64 | 2019 |
Accurate analysis of genuine CRISPR editing events with ampliCan K Labun, X Guo, A Chavez, G Church, JA Gagnon, E Valen Genome research 29 (5), 843-847, 2019 | 64 | 2019 |
PTB/hnRNP I is required for RNP remodeling during RNA localization in Xenopus oocytes RA Lewis, JA Gagnon, KL Mowry Molecular and cellular biology, 2008 | 62 | 2008 |
Nodal patterning without Lefty inhibitory feedback is functional but fragile KW Rogers, ND Lord, JA Gagnon, A Pauli, S Zimmerman, DC Aksel, ... Elife 6, e28785, 2017 | 61 | 2017 |
Directional transport is mediated by a Dynein-dependent step in an RNA localization pathway JA Gagnon, JA Kreiling, EA Powrie, TR Wood, KL Mowry PLoS Biology 11 (4), e1001551, 2013 | 51 | 2013 |
Conserved regulation of Nodal-mediated left-right patterning in zebrafish and mouse TG Montague, JA Gagnon, AF Schier Development 145 (24), dev171090, 2018 | 45 | 2018 |