| Hadal biosphere: insight into the microbial ecosystem in the deepest ocean on Earth T Nunoura, Y Takaki, M Hirai, S Shimamura, A Makabe, O Koide, ... Proceedings of the National Academy of Sciences 112 (11), E1230-E1236, 2015 | 285 | 2015 |
| Deep-sea vent ε-proteobacterial genomes provide insights into emergence of pathogens S Nakagawa, Y Takaki, S Shimamura, AL Reysenbach, K Takai, ... Proceedings of the National Academy of Sciences 104 (29), 12146-12150, 2007 | 264 | 2007 |
| Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus H Takami, Y Takaki, GJ Chee, S Nishi, S Shimamura, H Suzuki, S Matsui, ... Nucleic acids research 32 (21), 6292-6303, 2004 | 255 | 2004 |
| A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile T Nunoura, Y Chikaraishi, R Izaki, T Suwa, T Sato, T Harada, K Mori, ... Science 359 (6375), 559-563, 2018 | 216 | 2018 |
| Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii H Kuwahara, T Yoshida, Y Takaki, S Shimamura, S Nishi, M Harada, ... Current biology 17 (10), 881-886, 2007 | 190 | 2007 |
| Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments T Nunoura, H Hirayama, H Takami, H Oida, S Nishi, S Shimamura, ... Environmental microbiology 7 (12), 1967-1984, 2005 | 119 | 2005 |
| Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics-and methane-rich sediments off Shimokita Peninsula T Kobayashi, O Koide, K Mori, S Shimamura, T Matsuura, T Miura, ... Extremophiles 12, 519-527, 2008 | 101 | 2008 |
| Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench H Takami, S Nishi, J Lu, S Shimamura, Y Takaki Extremophiles 8, 351-356, 2004 | 100 | 2004 |
| Molecular characterization of inorganic sulfur‐compound metabolism in the deep‐sea epsilonproteobacterium Sulfurovum sp. NBC37‐1 M Yamamoto, S Nakagawa, S Shimamura, K Takai, K Horikoshi Environmental Microbiology 12 (5), 1144-1153, 2010 | 91 | 2010 |
| Microbial diversity in sediments from the bottom of the Challenger Deep, the Mariana Trench T Nunoura, M Nishizawa, M Hirai, S Shimamura, P Harnvoravongchai, ... Microbes and environments 33 (2), 186-194, 2018 | 81 | 2018 |
| Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont S Nakagawa, S Shimamura, Y Takaki, Y Suzuki, S Murakami, T Watanabe, ... The ISME Journal 8 (1), 40-51, 2014 | 76 | 2014 |
| Heterogeneous composition of key metabolic gene clusters in a vent mussel symbiont population T Ikuta, Y Takaki, Y Nagai, S Shimamura, M Tsuda, S Kawagucci, Y Aoki, ... The ISME journal 10 (4), 990-1001, 2016 | 74 | 2016 |
| Algivore or Phototroph? Plakobranchus ocellatus (Gastropoda) Continuously Acquires Kleptoplasts and Nutrition from Multiple Algal Species in Nature T Maeda, E Hirose, Y Chikaraishi, M Kawato, K Takishita, T Yoshida, ... Public Library of Science 7 (7), e42024, 2012 | 68 | 2012 |
| Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella paludicola, the first cultivated representative of the order Methanocellales S Sakai, Y Takaki, S Shimamura, M Sekine, T Tajima, H Kosugi, ... PLoS One 6 (7), e22898, 2011 | 63 | 2011 |
| Bacterial Lifestyle in a Deep-sea Hydrothermal Vent Chimney Revealed by the Genome Sequence of the Thermophilic Bacterium Deferribacter desulfuricans SSM1 Y Takaki, S Shimamura, S Nakagawa, Y Fukuhara, H Horikawa, A Ankai, ... DNA research 17 (3), 123-137, 2010 | 47 | 2010 |
| Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a … H Makita, E Tanaka, S Mitsunobu, M Miyazaki, T Nunoura, K Uematsu, ... Archives of microbiology 199, 335-346, 2017 | 43 | 2017 |
| Expression of genes for sulfur oxidation in the intracellular chemoautotrophic symbiont of the deep-sea bivalve Calyptogena okutanii M Harada, T Yoshida, H Kuwahara, S Shimamura, Y Takaki, C Kato, ... Extremophiles 13, 895-903, 2009 | 41 | 2009 |
| Variance and potential niche separation of microbial communities in subseafloor sediments off S himokita P eninsula, J apan T Nunoura, Y Takaki, S Shimamura, J Kakuta, H Kazama, M Hirai, ... Environmental Microbiology 18 (6), 1889-1906, 2016 | 37 | 2016 |
| Brevundimonas abyssalis sp. nov., a dimorphic prosthecate bacterium isolated from deep-subsea floor sediment T Tsubouchi, Y Shimane, K Usui, S Shimamura, K Mori, T Hiraki, A Tame, ... International journal of systematic and evolutionary microbiology 63 (Pt_6 …, 2013 | 37 | 2013 |
| Reductive genome evolution in chemoautotrophic intracellular symbionts of deep-sea Calyptogena clams H Kuwahara, Y Takaki, T Yoshida, S Shimamura, K Takishita, JD Reimer, ... Extremophiles 12, 365-374, 2008 | 37 | 2008 |
