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Nicholas Chia
Nicholas Chia
Data Science and Learning
在 anl.gov 的电子邮件经过验证 - 首页
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引用次数
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Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls
J Chen, N Chia, KR Kalari, JZ Yao, M Novotna, MM Paz Soldan, ...
Scientific reports 6 (1), 1-10, 2016
8752016
Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium
R Sinha, G Abu-Ali, E Vogtmann, AA Fodor, B Ren, A Amir, E Schwager, ...
Nature biotechnology 35 (11), 1077-1086, 2017
4442017
The microbiome of aseptically collected human breast tissue in benign and malignant disease
TJ Hieken, J Chen, TL Hoskin, M Walther-Antonio, S Johnson, S Ramaker, ...
Scientific reports 6 (1), 30751, 2016
3732016
Relationship between microbiota of the colonic mucosa vs feces and symptoms, colonic transit, and methane production in female patients with chronic constipation
G Parthasarathy, J Chen, X Chen, N Chia, HM O'Connor, PG Wolf, ...
Gastroenterology 150 (2), 367-379. e1, 2016
3712016
Diet and exercise orthogonally alter the gut microbiome and reveal independent associations with anxiety and cognition
SS Kang, PR Jeraldo, A Kurti, MEB Miller, MD Cook, K Whitlock, ...
Molecular neurodegeneration 9, 1-12, 2014
3602014
The microbiome of the chicken gastrointestinal tract
CJ Yeoman, N Chia, P Jeraldo, M Sipos, ND Goldenfeld, BA White
Animal health research reviews 13 (1), 89-99, 2012
3412012
Potential contribution of the uterine microbiome in the development of endometrial cancer
MRS Walther-António, J Chen, F Multinu, A Hokenstad, TJ Distad, ...
Genome medicine 8, 1-15, 2016
3202016
Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
J Sung, S Kim, JJT Cabatbat, S Jang, YS Jin, GY Jung, N Chia, PJ Kim
Nature communications 8 (1), 15393, 2017
2342017
Pregnancy's stronghold on the vaginal microbiome
MRS Walther-António, P Jeraldo, ME Berg Miller, CJ Yeoman, KE Nelson, ...
PloS one 9 (6), e98514, 2014
2232014
Identification of prosthetic joint infection pathogens using a shotgun metagenomics approach
MJ Thoendel, PR Jeraldo, KE Greenwood-Quaintance, JZ Yao, N Chia, ...
Clinical Infectious Diseases 67 (9), 1333-1338, 2018
2102018
Microbiome at the frontier of personalized medicine
PC Kashyap, N Chia, H Nelson, E Segal, E Elinav
Mayo Clinic Proceedings 92 (12), 1855-1864, 2017
1992017
Collecting fecal samples for microbiome analyses in epidemiology studies
R Sinha, J Chen, A Amir, E Vogtmann, J Shi, KS Inman, R Flores, ...
Cancer Epidemiology, Biomarkers & Prevention 25 (2), 407-416, 2016
1852016
Prolonged use of a proton pump inhibitor reduces microbial diversity: implications for Clostridium difficile susceptibility
CT Seto, P Jeraldo, R Orenstein, N Chia, JK DiBaise
Microbiome 2, 1-11, 2014
1822014
Shifts in the fecal microbiota associated with adenomatous polyps
VL Hale, J Chen, S Johnson, SC Harrington, TC Yab, TC Smyrk, H Nelson, ...
Cancer Epidemiology, Biomarkers & Prevention 26 (1), 85-94, 2017
1782017
A predictive index for health status using species-level gut microbiome profiling
VK Gupta, M Kim, U Bakshi, KY Cunningham, JM Davis III, KN Lazaridis, ...
Nature communications 11 (1), 4635, 2020
1682020
Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
ME Berg Miller, CJ Yeoman, N Chia, SG Tringe, FE Angly, RA Edwards, ...
Environmental microbiology 14 (1), 207-227, 2012
1662012
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes
SMD Seaver, F Liu, Q Zhang, J Jeffryes, JP Faria, JN Edirisinghe, ...
Nucleic acids research 49 (D1), D575-D588, 2021
1652021
Quantification of the relative roles of niche and neutral processes in structuring gastrointestinal microbiomes
P Jeraldo, M Sipos, N Chia, JM Brulc, AS Dhillon, ME Konkel, CL Larson, ...
Proceedings of the National Academy of Sciences 109 (25), 9692-9698, 2012
1612012
Direct detection and identification of prosthetic joint infection pathogens in synovial fluid by metagenomic shotgun sequencing
MI Ivy, MJ Thoendel, PR Jeraldo, KE Greenwood-Quaintance, ...
Journal of clinical microbiology 56 (9), 10.1128/jcm. 00402-18, 2018
1532018
Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea
EJ Battaglioli, VL Hale, J Chen, P Jeraldo, C Ruiz-Mojica, BA Schmidt, ...
Science translational medicine 10 (464), eaam7019, 2018
1462018
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