| ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine MA Zeller, TK Anderson, RW Walia, AL Vincent, PC Gauger BMC bioinformatics 19, 1-10, 2018 | 55 | 2018 |
| Detection of live attenuated influenza vaccine virus and evidence of reassortment in the US swine population A Sharma, MA Zeller, G Li, KM Harmon, J Zhang, H Hoang, TK Anderson, ... Journal of Veterinary Diagnostic Investigation 32 (2), 301-311, 2020 | 52 | 2020 |
| octoFLU: automated classification for the evolutionary origin of influenza A virus gene sequences detected in US Swine J Chang, TK Anderson, MA Zeller, PC Gauger, AL Vincent Microbiology resource announcements 8 (32), 10.1128/mra. 00673-19, 2019 | 39 | 2019 |
| Antigenic evolution of H3N2 influenza A viruses in swine in the United States from 2012 to 2016 MJ Bolton, EJ Abente, D Venkatesh, JA Stratton, M Zeller, TK Anderson, ... Influenza and other respiratory viruses 13 (1), 83-90, 2019 | 31 | 2019 |
| Complete coding genome sequence of a novel porcine reproductive and respiratory syndrome virus 2 restriction fragment length polymorphism 1-4-4 lineage 1C variant identified in … G Trevisan, G Li, CAA Moura, K Coleman, P Thomas, J Zhang, P Gauger, ... Microbiology Resource Announcements 10 (21), 10.1128/mra. 00448-21, 2021 | 29 | 2021 |
| Complete genome sequences of two novel human-like H3N2 influenza A viruses, A/swine/Oklahoma/65980/2017 (H3N2) and A/Swine/Oklahoma/65260/2017 (H3N2), detected in swine in the … MA Zeller, G Li, KM Harmon, J Zhang, AL Vincent, TK Anderson, ... Microbiology Resource Announcements 7 (20), 10.1128/mra. 01203-18, 2018 | 25 | 2018 |
| Characterization of contemporary 2010.1 H3N2 swine influenza A viruses circulating in United States pigs JD Powell, EJ Abente, J Chang, CK Souza, DS Rajao, TK Anderson, ... Virology 553, 94-101, 2021 | 20 | 2021 |
| PRRSV2 genetic diversity defined by RFLP patterns in the United States from 2007 to 2019 G Trevisan, A Sharma, P Gauger, KM Harmon, J Zhang, R Main, M Zeller, ... Journal of Veterinary Diagnostic Investigation 33 (5), 920-931, 2021 | 18 | 2021 |
| Machine learning prediction and experimental validation of antigenic drift in H3 influenza A viruses in swine MA Zeller, PC Gauger, ZW Arendsee, CK Souza, AL Vincent, ... Msphere 6 (2), 10.1128/msphere. 00920-20, 2021 | 18 | 2021 |
| Spatial and temporal coevolution of N2 neuraminidase and H1 and H3 hemagglutinin genes of influenza A virus in US swine MA Zeller, J Chang, AL Vincent, PC Gauger, TK Anderson Virus Evolution 7 (2), veab090, 2021 | 12 | 2021 |
| Implementing a user‐friendly format to analyze PRRSV next‐generation sequencing results and associating breeding herd production performance with number of PRRSV strains and … G Trevisan, M Zeller, G Li, J Zhang, P Gauger, DCL Linhares Transboundary and Emerging Diseases 69 (5), e2214-e2229, 2022 | 10 | 2022 |
| Genetic and antigenic characterization of an expanding H3 influenza A virus clade in US swine visualized by Nextstrain MN Neveau, MA Zeller, BS Kaplan, CK Souza, PC Gauger, AL Vincent, ... Msphere 7 (3), e00994-21, 2022 | 10 | 2022 |
| Characterization of a 2016-2017 human seasonal H3 influenza a virus spillover now endemic to US swine A Sharma, MA Zeller, CK Souza, TK Anderson, AL Vincent, K Harmon, ... Msphere 7 (1), e00809-21, 2022 | 10 | 2022 |
| The genomic landscape of swine influenza A viruses in Southeast Asia MA Zeller, J Ma, FY Wong, S Tum, A Hidano, H Holt, T Chhay, S Sorn, ... Proceedings of the National Academy of Sciences 120 (33), e2301926120, 2023 | 9 | 2023 |
| A recombinant porcine reproductive and respiratory syndrome virus type 2 field strain derived from two PRRSV-2-modified live virus vaccines G Trevisan, D Magstadt, A Woods, J Sparks, M Zeller, G Li, KM Krueger, ... Frontiers in Veterinary Science 10, 1149293, 2023 | 6 | 2023 |
| Coordinated evolution between N2 neuraminidase and H1 and H3 hemagglutinin genes increased influenza A virus genetic diversity in swine MA Zeller, J Chang, AL Vincent, PC Gauger, TK Anderson BioRxiv, 2020.05. 29.123828, 2020 | 4 | 2020 |
| classLog: Logistic regression for the classification of genetic sequences MA Zeller, ZW Arendsee, GJD Smith, TK Anderson Frontiers in Virology 3, 1215012, 2023 | 2 | 2023 |
| Phylogenetic-based methods for fine-scale classification of PRRSV-2 ORF5 sequences: a comparison of their robustness and reproducibility K VanderWaal, N Pamornchainvakul, M Kikuti, D Linhares, G Trevisan, ... bioRxiv, 2024.05. 13.593920, 2024 | 1 | 2024 |
| 2018-2019 human seasonal H3N2 influenza A virus spillovers into swine with demonstrated virus transmission in pigs were not sustained in the pig population JD Powell, MN Thomas, TK Anderson, MA Zeller, PC Gauger, ... bioRxiv, 2024.01. 12.575431, 2024 | 1 | 2024 |
| Use of the ISU FLUture multisequence identity tool for rapid interpretation of swine influenza A virus sequences in the United States MA Zeller, A Saxena, TK Anderson, AL Vincent, PC Gauger Journal of Veterinary Diagnostic Investigation 34 (5), 874-878, 2022 | 1 | 2022 |
