| Deep-learning-assisted diagnosis for knee magnetic resonance imaging: development and retrospective validation of MRNet N Bien, P Rajpurkar, RL Ball, J Irvin, A Park, E Jones, M Bereket, BN Patel, ... PLoS medicine 15 (11), e1002699, 2018 | 674 | 2018 |
| AppendiXNet: deep learning for diagnosis of appendicitis from a small dataset of CT exams using video pretraining P Rajpurkar, A Park, J Irvin, C Chute, M Bereket, D Mastrodicasa, ... Scientific reports 10 (1), 3958, 2020 | 99 | 2020 |
| Modelling Cellular Perturbations with the Sparse Additive Mechanism Shift Variational Autoencoder M Bereket, T Karaletsos Advances in Neural Information Processing Systems 36, 2024 | 10 | 2024 |
| An allelic-series rare-variant association test for candidate-gene discovery ZR McCaw, C O’Dushlaine, H Somineni, M Bereket, C Klein, T Karaletsos, ... The American Journal of Human Genetics 110 (8), 1330-1342, 2023 | 8 | 2023 |
| Machine learning encoding of liver biopsy images enables prediction of molecular measurements in a NASH F3/F4 fibrosis clinical cohort MD Bereket, FP Casale, R Loomba, A Sanyal, S Harrison, Z Younossi, ... Journal of Hepatology 77, S409, 2022 | 2 | 2022 |
| Convolutional neural networks of H&E-stained biopsy images accurately quantify histologic features of non-alcoholic steatohepatitis FP Casale, MD Bereket, R Loomba, A Sanyal, S Harrison, ZM Younossi, ... Journal of Hepatology 73, S73, 2020 | 1 | 2020 |
| HistoGWAS: An AI-enabled Framework for Automated Genetic Analysis of Tissue Phenotypes in Histology Cohorts S Chaudhary, A Voigts, M Bereket, ML Albert, K Schwamborn, E Zeggini, ... bioRxiv, 2024.06. 09.597752, 2024 | | 2024 |
| Discovery platform FP Casale, M Bereket, M Albert US Patent 12,002,559, 2024 | | 2024 |
| CRISPR perturbation in iPSC-derived hepatic stellate cells reveals role for TNF-driven interferon response in chronic liver disease K Haston, N Ranu, L Kategaya, E Lubeck, MD Bereket, FP Casale, ... Journal of Hepatology 77, S762, 2022 | | 2022 |
| Machine learned histological fibrosis score empowers characterization of baseline gene signatures associated with fibrosis progression or regression in a NASH F3/F4 clinical trial MD Bereket, FP Casale, L Kategaya, A Shcherbina, N Ranu, A Lee, ... Journal of Hepatology 77, S31, 2022 | | 2022 |
