Synthetic biology of cyanobacteria: unique challenges and opportunities BM Berla, R Saha, CM Immethun, CD Maranas, TS Moon, HB Pakrasi Frontiers in microbiology 4, 246, 2013 | 341 | 2013 |
Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism R Saha, PF Suthers, CD Maranas PLoS One 6 (7), e21784, 2011 | 236 | 2011 |
Recent advances in the reconstruction of metabolic models and integration of omics data R Saha, A Chowdhury, CD Maranas Current Opinion in Biotechnology 29, 39-45, 2014 | 139 | 2014 |
Metabolic engineering of the pentose phosphate pathway for enhanced limonene production in the cyanobacterium Synechocystis sp. PCC 6803 PC Lin, R Saha, F Zhang, HB Pakrasi Scientific reports 7 (1), 17503, 2017 | 120 | 2017 |
Diurnal Regulation of Cellular Processes in the Cyanobacterium Synechocystis sp. Strain PCC 6803: Insights from Transcriptomic, Fluxomic, and Physiological … R Saha, D Liu, A Hoynes-O’Connor, M Liberton, J Yu, ... MBio 7 (3), 10.1128/mbio. 00464-16, 2016 | 117 | 2016 |
Reconstruction and Comparison of the Metabolic Potential of Cyanobacteria Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC 6803 R Saha, AT Verseput, BM Berla, TJ Mueller, HB Pakrasi, CD Maranas PloS one 7 (10), e48285, 2012 | 112 | 2012 |
Nitrogen-use efficiency in maize (Zea mays L.): from ‘omics’ studies to metabolic modelling M Simons, R Saha, L Guillard, G Clément, P Armengaud, R Cañas, ... Journal of experimental botany 65 (19), 5657-5671, 2014 | 95 | 2014 |
Assessing the Metabolic Impact of Nitrogen Availability using a Compartmentalized Maize Leaf Genome-Scale Model M Simons, R Saha (joint first author), N Amiour, A Kumar, L Guillard, ... Plant physiology 166 (3), 1659-1674, 2014 | 93 | 2014 |
Cyanobacterial alkanes modulate photosynthetic cyclic electron flow to assist growth under cold stress BM Berla, R Saha, CD Maranas, HB Pakrasi Scientific reports 5, 2015 | 61 | 2015 |
Exploring the effects of carbon sources on the metabolic capacity for shikimic acid production in Escherichia coli using in silico metabolic predictions JO Ahn, HW Lee, R Saha, MS Park, JK Jung, DY Lee Journal of microbiology and biotechnology 18 (11), 1773-1784, 2008 | 51 | 2008 |
Global proteomic analysis reveals an exclusive role of thylakoid membranes in bioenergetics of a model cyanobacterium M Liberton, R Saha, JM Jacobs, AY Nguyen, MA Gritsenko, RD Smith, ... Molecular & Cellular Proteomics 15 (6), 2021-2032, 2016 | 37 | 2016 |
Rhodopseudomonas palustris: A biotechnology chassis B Brown, M Wilkins, R Saha Biotechnology Advances 60, 108001, 2022 | 34 | 2022 |
Web-based applications for building, managing and analysing kinetic models of biological systems DY Lee, R Saha, FNK Yusufi, W Park, IA Karimi Briefings in bioinformatics 10 (1), 65-74, 2009 | 32 | 2009 |
Modeling the Interplay between Photosynthesis, CO2 Fixation, and the Quinone Pool in a Purple Non-Sulfur Bacterium A Alsiyabi, C Immethun, R Saha Scientific Reports 9, 2019 | 31 | 2019 |
Metabolic Modeling Elucidates the Transactions in the Rumen Microbiome and the Shifts upon Virome Interactions M Islam, SC Fernando, R Saha Frontiers in Microbiolgy 10 (2412), 2019 | 29 | 2019 |
Rhodopseudomonas palustris CGA009 polyhydroxybutyrate production from a lignin aromatic and quantification via flow cytometry B Brown, C Immethun, M Wilkins, R Saha Bioresource Technology Reports 11, 100474, 2020 | 24 | 2020 |
Kinetic modeling of metabolism: Present and future MM Islam, WL Schroeder, R Saha Current Opinion in Systems Biology 26, 72-78, 2021 | 21 | 2021 |
Synergistic experimental and computational approach identifies novel strategies for polyhydroxybutyrate overproduction A Alsiyabi, B Brown, C Immethun, D Long, M Wilkins, R Saha Metabolic Engineering 68, 1-13, 2021 | 19 | 2021 |
An integrated computational and experimental study to investigate Staphylococcus aureus metabolism M Mazharul Islam, VC Thomas, M Van Beek, JS Ahn, AA Alqarzaee, ... NPJ systems biology and applications 6 (1), 3, 2020 | 19 | 2020 |
OptFill: a tool for infeasible cycle-free gapfilling of stoichiometric metabolic models WL Schroeder, R Saha IScience 23 (1), 2020 | 19 | 2020 |