microRNA-181a enhances cell proliferation in acute lymphoblastic leukemia by targeting EGR1 L Verduci, G Azzalin, S Gioiosa, C Carissimi, I Laudadio, V Fulci, ... Leukemia research 39 (4), 479-485, 2015 | 70 | 2015 |
ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites C Carissimi, I Laudadio, E Cipolletta, S Gioiosa, M Mihailovich, T Bonaldi, ... Nucleic acids research 43 (3), 1498-1512, 2015 | 53 | 2015 |
A gene expression atlas for different kinds of stress in the mouse brain T Flati, S Gioiosa, G Chillemi, A Mele, A Oliverio, C Mannironi, A Rinaldi, ... Scientific Data 7 (1), 437, 2020 | 43 | 2020 |
HPC-REDItools: a novel HPC-aware tool for improved large scale RNA-editing analysis T Flati, S Gioiosa, N Spallanzani, I Tagliaferri, MA Diroma, G Pesole, ... BMC bioinformatics 21, 1-12, 2020 | 38 | 2020 |
CoVaCS: a consensus variant calling system M Chiara, S Gioiosa, G Chillemi, M D’Antonio, T Flati, E Picardi, ... BMC genomics 19, 1-9, 2018 | 34 | 2018 |
ELIXIR-IT HPC@ CINECA: high performance computing resources for the bioinformatics community T Castrignanò, S Gioiosa, T Flati, M Cestari, E Picardi, M Chiara, M Fratelli, ... BMC bioinformatics 21, 1-17, 2020 | 31 | 2020 |
Muscle transcriptome analysis identifies genes involved in ciliogenesis and the molecular cascade associated with intramuscular fat content in Large White heavy pigs M Zappaterra, S Gioiosa, G Chillemi, P Zambonelli, R Davoli PLoS One 15 (5), e0233372, 2020 | 28 | 2020 |
AGO 2 promotes telomerase activity and interaction between the telomerase components TERT and TERC I Laudadio, F Orso, G Azzalin, C Calabrò, F Berardinelli, E Coluzzi, ... EMBO reports 20 (2), e45969, 2019 | 27 | 2019 |
Clinical phenotypes and quality of life to define post-COVID-19 syndrome: a cluster analysis of the multinational, prospective ORCHESTRA cohort E Gentilotti, A Górska, A Tami, R Gusinow, M Mirandola, JR Baño, ... EClinicalMedicine 62, 2023 | 19 | 2023 |
PeachVar-DB: a curated collection of genetic variations for the interactive analysis of peach genome data M Cirilli, T Flati, S Gioiosa, I Tagliaferri, A Ciacciulli, Z Gao, S Gattolin, ... Plant and Cell Physiology 59 (1), e2-e2, 2018 | 15 | 2018 |
Dissecting the Gene Expression Networks Associated with Variations in the Major Components of the Fatty Acid Semimembranosus Muscle Profile in Large White … M Zappaterra, S Gioiosa, G Chillemi, P Zambonelli, R Davoli Animals 11 (3), 628, 2021 | 14 | 2021 |
Differential expression of hippocampal circular RNAs in the BTBR mouse model for autism spectrum disorder S Gasparini, G Del Vecchio, S Gioiosa, T Flati, T Castrignano, I Legnini, ... Molecular Neurobiology 57, 2301-2313, 2020 | 14 | 2020 |
Massive NGS data analysis reveals hundreds of potential novel gene fusions in human cell lines S Gioiosa, M Bolis, T Flati, A Massini, E Garattini, G Chillemi, M Fratelli, ... GigaScience 7 (10), giy062, 2018 | 10 | 2018 |
MicroRNAs diagnostic and prognostic value as predictive markers for malignant mesothelioma E Sturchio, MG Berardinelli, P Boccia, M Zanellato, S Gioiosa Archives of Environmental & Occupational Health 75 (8), 471-482, 2020 | 9 | 2020 |
Gallop racing shifts mature mRNA towards introns: Does exercise-induced stress enhance genome plasticity? K Cappelli, S Mecocci, S Gioiosa, A Giontella, M Silvestrelli, R Cherchi, ... Genes 11 (4), 410, 2020 | 9 | 2020 |
DROPA: DRIP-seq optimized peak annotator M Russo, B De Lucca, T Flati, S Gioiosa, G Chillemi, G Capranico BMC bioinformatics 20, 1-7, 2019 | 9 | 2019 |
Frataxin deficiency in Friedreich’s ataxia is associated with reduced levels of HAX-1, a regulator of cardiomyocyte death and survival F Tiano, F Amati, F Cherubini, E Morini, C Vancheri, S Maletta, S Fortuni, ... Human Molecular Genetics 29 (3), 471-482, 2020 | 8 | 2020 |
Evidence of distinct gene functional patterns in GC‐poor and GC‐rich isochores in Bos taurus S Arhondakis, M Milanesi, T Castrignanò, S Gioiosa, A Valentini, ... Animal Genetics 51 (3), 358-368, 2020 | 6 | 2020 |
Characterization of transcription termination‐associated RNAs: new insights into their biogenesis, tailing, and expression in primary tumors I Laudadio, S Formichetti, S Gioiosa, F Klironomos, N Rajewsky, ... International Journal of Genomics 2018 (1), 1243858, 2018 | 6 | 2018 |
RNA editing detection in HPC infrastructures C Lo Giudice, L Mansi, T Flati, S Gioiosa, G Chillemi, P Libro, ... RNA Bioinformatics, 253-270, 2021 | 3 | 2021 |