Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ... Genome biology 20 (1), 1-18, 2019 | 783 | 2019 |
TIR-Learner, a new ensemble method for TIR transposable element annotation, provides evidence for abundant new transposable elements in the maize genome W Su, X Gu, T Peterson Molecular plant 12 (3), 447-460, 2019 | 107 | 2019 |
A tutorial of EDTA: extensive de novo TE annotator W Su, S Ou, MB Hufford, T Peterson Plant Transposable Elements: Methods and Protocols, 55-67, 2021 | 28 | 2021 |
Retrotransposons hijack alt-EJ for DNA replication and eccDNA biogenesis F Yang, W Su, OW Chung, L Tracy, L Wang, DA Ramsden, ZZZ Zhang Nature 620 (7972), 218-225, 2023 | 22 | 2023 |
Retrotransposon activation during Drosophila metamorphosis conditions adult antiviral responses L Wang, L Tracy, W Su, F Yang, Y Feng, N Silverman, ZZZ Zhang Nature genetics 54 (12), 1933-1945, 2022 | 15 | 2022 |
Author Correction: Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ... Genome biology 23, 2022 | 10* | 2022 |
Ectopic expression of a maize gene is induced by composite insertions generated through alternative transposition W Su, T Zuo, T Peterson Genetics 216 (4), 1039-1049, 2020 | 10 | 2020 |
Evolutionary impacts of alternative transposition W Su, SP Sharma, T Peterson Origin and evolution of biodiversity, 113-130, 2018 | 10 | 2018 |
CanDriS: posterior profiling of cancer-driving sites based on two-component evolutionary model W Zhao, J Yang, J Wu, G Cai, Y Zhang, J Haltom, W Su, MJ Dong, S Chen, ... Briefings in Bioinformatics 22 (5), bbab131, 2021 | 7 | 2021 |
‘parasites’ hijack a DNA-repair pathway to form circular DNA F Yang, W Su Nature 6327, 7, 2023 | | 2023 |
Retrotransposons hijack alt-EJ DNA repair process for mobilization and eccDNA biogenesis F Yang, W Su, OW Chung, L Tracy, L Wang, DA Ramsden, ZZZ Zhang bioRxiv, 2022.09. 25.509424, 2022 | | 2022 |
The impact of Terminal Inverted Repeat (TIR) transposable elements on plant genomes W Su Iowa State University, 2020 | | 2020 |