Neural ordinary differential equations RTQ Chen, Y Rubanova, J Bettencourt, DK Duvenaud Advances in neural information processing systems 31, 2018 | 5083 | 2018 |
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1794* | 2020 |
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 915 | 2020 |
Latent ordinary differential equations for irregularly-sampled time series Y Rubanova, RTQ Chen, DK Duvenaud Advances in neural information processing systems 32, 2019 | 851 | 2019 |
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254. e39, 2021 | 319 | 2021 |
The evolutionary landscape of localized prostate cancers drives clinical aggression SMG Espiritu, LY Liu, Y Rubanova, V Bhandari, EM Holgersen, LM Szyca, ... Cell 173 (4), 1003-1013. e15, 2018 | 236 | 2018 |
Simple gnn regularisation for 3d molecular property prediction & beyond J Godwin, M Schaarschmidt, A Gaunt, A Sanchez-Gonzalez, Y Rubanova, ... arXiv preprint arXiv:2106.07971, 2021 | 112 | 2021 |
A generalist neural algorithmic learner B Ibarz, V Kurin, G Papamakarios, K Nikiforou, M Bennani, R Csordás, ... Learning on graphs conference, 2: 1-2: 23, 2022 | 56 | 2022 |
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig Y Rubanova, R Shi, CF Harrigan, R Li, J Wintersinger, N Sahin, ... Nature communications 11 (1), 731, 2020 | 54* | 2020 |
Neural ordinary differential equations (2018) RTQ Chen, Y Rubanova, J Bettencourt, D Duvenaud arXiv preprint arXiv:1806.07366, 1806 | 51 | 1806 |
Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... BioRxiv, 312041, 2018 | 50* | 2018 |
Amortized bayesian optimization over discrete spaces Y Rubanova, D Dohan, K Swersky, K Murphy Conference on Uncertainty in Artificial Intelligence, 769-778, 2020 | 41* | 2020 |
Graph network simulators can learn discontinuous, rigid contact dynamics KR Allen, TL Guevara, Y Rubanova, K Stachenfeld, A Sanchez-Gonzalez, ... Conference on Robot Learning, 1157-1167, 2023 | 30 | 2023 |
Constraint-based graph network simulator Y Rubanova, A Sanchez-Gonzalez, T Pfaff, P Battaglia arXiv preprint arXiv:2112.09161, 2021 | 26 | 2021 |
Learning rigid dynamics with face interaction graph networks KR Allen, Y Rubanova, T Lopez-Guevara, W Whitney, ... arXiv preprint arXiv:2212.03574, 2022 | 25 | 2022 |
Very deep graph neural networks via noise regularisation J Godwin, M Schaarschmidt, A Gaunt, A Sanchez-Gonzalez, Y Rubanova, ... arXiv preprint arXiv:2106.07971 2, 2021 | 24 | 2021 |
TrackSigFreq: subclonal reconstructions based on mutation signatures and allele frequencies CF Harrigan, Y Rubanova, Q Morris, A Selega PACIFIC SYMPOSIUM ON BIOCOMPUTING 2020, 238-249, 2019 | 13 | 2019 |
Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types. bioRxiv (2018) SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... URL https://www. biorxiv. org/content/10.1101/312041v4, 0 | 4 | |
Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... nature genetics 55 (6), 1076-1076, 2023 | 2 | 2023 |
Author Correction: The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 614 (7948), E42-E42, 2023 | 2 | 2023 |