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Jingxue Xin
Jingxue Xin
在 stanford.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
TFAP2C-and p63-dependent networks sequentially rearrange chromatin landscapes to drive human epidermal lineage commitment
L Li, Y Wang, JL Torkelson, G Shankar, JM Pattison, HH Zhen, F Fang, ...
Cell Stem Cell 24 (2), 271-284. e8, 2019
812019
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation
J Xin, H Zhang, Y He, Z Duren, C Bai, L Chen, X Luo, DS Yan, C Zhang, ...
Nature communications 11 (1), 4928, 2020
552020
Time course regulatory analysis based on paired expression and chromatin accessibility data
Z Duren, X Chen, J Xin, Y Wang, WH Wong
Genome research 30 (4), 622-634, 2020
412020
Drosophila TRF2 and TAF9 regulate lipid droplet size and phospholipid fatty acid composition
W Fan, SM Lam, J Xin, X Yang, Z Liu, Y Liu, Y Wang, G Shui, X Huang
PLoS genetics 13 (3), e1006664, 2017
322017
Regulatory analysis of single cell multiome gene expression and chromatin accessibility data with scREG
Z Duren, F Chang, F Naqing, J Xin, Q Liu, WH Wong
Genome biology 23 (1), 114, 2022
242022
Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data
Z Duren, WS Lu, JG Arthur, P Shah, J Xin, F Meschi, ML Li, CM Nemec, ...
Nature Communications 12 (1), 4763, 2021
212021
Genetic adaptation of skin pigmentation in highland Tibetans
Z Yang, C Bai, Y Pu, Q Kong, Y Guo, Ouzhuluobu, Gengdeng, X Liu, ...
Proceedings of the National Academy of Sciences 119 (40), e2200421119, 2022
152022
Identifying network biomarkers based on protein-protein interactions and expression data
J Xin, X Ren, L Chen, Y Wang
BMC medical genomics 8 (Suppl 2), S11, 2015
142015
A semisupervised classification approach for multidomain networks with domain selection
C Chen, J Xin, Y Wang, L Chen, MK Ng
IEEE Transactions on Neural Networks and Learning Systems 30 (1), 269-283, 2018
132018
Lipid-gene regulatory network reveals coregulations of triacylglycerol with phosphatidylinositol/lysophosphatidylinositol and with hexosyl-ceramide
W Wang, J Xin, X Yang, SM Lam, G Shui, Y Wang, X Huang
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2019
112019
ZokorDB: tissue specific regulatory network annotation for non‐coding elements of plateau zokor
J Xin, J Hao, L Chen, T Zhang, L Li, L Chen, W Zhao, X Lu, P Shi, Y Wang
Quantitative Biology 8 (1), 43-50, 2020
52020
Reusability report: compressing regulatory networks to vectors for interpreting gene expression and genetic variants
W Zeng, J Xin, R Jiang, Y Wang
Nature Machine Intelligence 3 (7), 576-580, 2021
32021
Heritability enrichment in context-specific regulatory networks improves phenotype-relevant tissue identification
Z Feng, Z Duren, J Xin, Q Yuan, Y He, B Su, WH Wong, Y Wang
Elife 11, e82535, 2022
22022
scTIE: data integration and inference of gene regulation using single-cell temporal multimodal data
Y Lin, TY Wu, X Chen, S Wan, B Chao, J Xin, JYH Yang, WH Wong, ...
bioRxiv, 2023
12023
Data integration and inference of gene regulation using single-cell temporal multimodal data with scTIE
Y Lin, TY Wu, X Chen, S Wan, B Chao, J Xin, JYH Yang, WH Wong, ...
Genome research 34 (1), 119-133, 2024
2024
Regulatory analysis of single cell multiome gene expression and chromatin accessibility data with scREG
J Xin, Q Liu, WH Wong, Z Duren, F Naqing, F Chang
figshare Academic Research System, 2022
2022
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