| Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes A Zaitsev, M Chelushkin, D Dyikanov, I Cheremushkin, B Shpak, K Nomie, ... Cancer Cell 40 (8), 879-894. e16, 2022 | 75 | 2022 |
| Promiscuous Coxiella burnetii CD4 Epitope Clusters Associated With Human Recall Responses Are Candidates for a Novel T-Cell Targeted Multi-Epitope Q Fever … A Scholzen, G Richard, L Moise, LA Baeten, PM Reeves, WD Martin, ... Frontiers in immunology 10, 207, 2019 | 44 | 2019 |
| Q-vaxcelerate: A distributed development approach for a new Coxiella burnetii vaccine PM Reeves, SR Paul, AE Sluder, TA Brauns, MC Poznansky Human Vaccines & Immunotherapeutics 13 (12), 2977-2981, 2017 | 32 | 2017 |
| Application and utility of mass cytometry in vaccine development PM Reeves, AE Sluder, SR Paul, A Scholzen, S Kashiwagi, ... The FASEB Journal 32 (1), 5-15, 2018 | 27 | 2018 |
| Coxiella burnetii epitope-specific T-cell responses in patients with chronic Q fever A Scholzen, G Richard, L Moise, E Hartman, CP Bleeker-Rovers, ... Infection and Immunity 87 (10), 10.1128/iai. 00213-19, 2019 | 13 | 2019 |
| Evaluation of a Human T Cell-Targeted Multi-Epitope Vaccine for Q Fever in Animal Models of Coxiella burnetii Immunity AE Sluder, S Raju Paul, L Moise, C Dold, G Richard, L Silva-Reyes, ... Frontiers in immunology 13, 901372, 2022 | 11 | 2022 |
| Novel multiparameter correlates of Coxiella burnetii infection and vaccination identified by longitudinal deep immune profiling PM Reeves, S Raju Paul, L Baeten, SE Korek, Y Yi, J Hess, D Sobell, ... Scientific Reports 10 (1), 13311, 2020 | 11 | 2020 |
| Novel machine learning based deconvolution algorithm results in accurate description of tumor microenvironment from bulk RNAseq A Zaytcev, M Chelushkin, K Nuzhdina, A Bagaev, D Dyykanov, V Zyrin, ... Cancer Research 80 (16_Supplement), 853-853, 2020 | 5 | 2020 |
| Natural Exposure- and Vaccination-Induced Profiles of Ex Vivo Whole Blood Cytokine Responses to Coxiella burnetii S Raju Paul, A Scholzen, G Mukhtar, S Wilkinson, P Hobson, RK Dzeng, ... Frontiers in Immunology 13, 886698, 2022 | 4 | 2022 |
| B cell‐dependent subtypes and treatment‐based immune correlates to survival in stage 3 and 4 lung adenocarcinomas SR Paul, I Valiev, SE Korek, V Zyrin, D Shamsutdinova, O Gancharova, ... FASEB BioAdvances 5 (4), 156, 2023 | 2 | 2023 |
| Deep immune profiling of whole blood to identify early immune signatures that correlate to patient outcome after major trauma AE Mendoza, SR Paul, M El Hechi, L Naar, C Nederpelt, S Mikdad, ... Journal of Trauma and Acute Care Surgery 90 (6), 959-966, 2021 | 2 | 2021 |
| Non-small cell lung cancer: Analysis using mass cytometry and next generation sequencing reveals new opportunities for the development of personalized therapies. S Raju Paul, A Bagaev, I Valiev, V Zyrin, A Zaitsev, D Dyykanov, ... Journal of Clinical Oncology 38 (15_suppl), e21026-e21026, 2020 | 1 | 2020 |
| Coxiella burnetii epitope-specific T-cell responses in chronic Q fever patients A Scholzen, G Richard, L Moise, E Hartman, CP Bleeker-Rovers, ... bioRxiv, 582007, 2019 | 1 | 2019 |
| Cytometry profiling of ex vivo recall responses to Coxiella burnetii in previously naturally exposed individuals reveals long-term changes in both adaptive and … S Raju Paul, A Scholzen, PM Reeves, R Shepard, JM Hess, RK Dzeng, ... Frontiers in Immunology 14, 1249581, 2023 | | 2023 |
| Cross-sectional study of peripheral immune cell phenotypes in individuals with amyotrophic lateral sclerosis assessed using mass cytometry SR Paul, RK Dzeng, L Valine, R Cimagala, A Sluder, RF Sirbulescu, ... MUSCLE & NERVE 68, S4-S4, 2023 | | 2023 |
| Design and Population Enrolled in a Longitudinal Study to Investigate Changes in Circulating Immune Cells in Individuals with ALS C Noll, A Stepler, S Meijia-Almero, J Topping, C Moline, N Surguladze, ... MUSCLE & NERVE 68, S6-S6, 2023 | | 2023 |
| Viral transcript and tumor immune microenvironment-based transcriptomic profiling of HPV-associated head and neck cancer identifies subtypes associated with prognosis D Kiriy, D Tychinin, N Kotlov, O Kudryashova, A Nikitina, A Tyshevich, ... Cancer Research 82 (12_Supplement), 3823-3823, 2022 | | 2022 |
| Immune functional portraits of head and neck cancer using next generation sequencing. S Raju Paul, N Kotlov, V Svekolkin, F Frenkel, N Almog, M Tsiper, ... Journal of Clinical Oncology 38 (15_suppl), 6561-6561, 2020 | | 2020 |
