JPred4: a protein secondary structure prediction server A Drozdetskiy, C Cole, J Procter, GJ Barton Nucleic acids research 43 (W1), W389-W394, 2015 | 1925 | 2015 |
The Jpred 3 secondary structure prediction server C Cole, JD Barber, GJ Barton Nucleic acids research 36 (suppl_2), W197-W201, 2008 | 1823 | 2008 |
How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use? NJ Schurch, P Schofield, M Gierliński, C Cole, A Sherstnev, V Singh, ... Rna 22 (6), 839-851, 2016 | 890 | 2016 |
Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs C Cole, A Sobala, C Lu, SR Thatcher, A Bowman, JWS Brown, PJ Green, ... Rna 15 (12), 2147-2160, 2009 | 674 | 2009 |
System-wide changes to SUMO modifications in response to heat shock F Golebiowski, I Matic, MH Tatham, C Cole, Y Yin, A Nakamura, J Cox, ... Science signaling 2 (72), ra24-ra24, 2009 | 568 | 2009 |
Regulation of the miR-212/132 locus by MSK1 and CREB in response to neurotrophins J Remenyi, CJ Hunter, C Cole, H Ando, S Impey, CE Monk, KJ Martin, ... Biochemical Journal 428 (2), 281-291, 2010 | 262 | 2010 |
14-3-3-Pred: improved methods to predict 14-3-3-binding phosphopeptides F Madeira, M Tinti, G Murugesan, E Berrett, M Stafford, R Toth, C Cole, ... Bioinformatics 31 (14), 2276-2283, 2015 | 207 | 2015 |
Tmem79/Matt is the matted mouse gene and is a predisposing gene for atopic dermatitis in human subjects SP Saunders, CSM Goh, SJ Brown, CNA Palmer, RM Porter, C Cole, ... Journal of Allergy and Clinical Immunology 132 (5), 1121-1129, 2013 | 167 | 2013 |
Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation A Sherstnev, C Duc, C Cole, V Zacharaki, C Hornyik, F Ozsolak, PM Milos, ... Nature structural & molecular biology 19 (8), 845-852, 2012 | 166 | 2012 |
Filaggrin-stratified transcriptomic analysis of pediatric skin identifies mechanistic pathways in patients with atopic dermatitis C Cole, K Kroboth, NJ Schurch, A Sandilands, A Sherstnev, GM O'Regan, ... Journal of allergy and clinical immunology 134 (1), 82-91, 2014 | 163 | 2014 |
Severe dermatitis, multiple allergies, and metabolic wasting syndrome caused by a novel mutation in the N-terminal plakin domain of desmoplakin MA McAleer, E Pohler, FJD Smith, NJ Wilson, C Cole, S MacGowan, ... Journal of Allergy and Clinical Immunology 136 (5), 1268-1276, 2015 | 124 | 2015 |
Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment M Gierliński, C Cole, P Schofield, NJ Schurch, A Sherstnev, V Singh, ... Bioinformatics 31 (22), 3625-3630, 2015 | 118 | 2015 |
Side‐chain conformational entropy at protein–protein interfaces C Cole, J Warwicker Protein Science 11 (12), 2860-2870, 2002 | 110 | 2002 |
Haploinsufficiency for AAGAB causes clinically heterogeneous forms of punctate palmoplantar keratoderma E Pohler, O Mamai, J Hirst, M Zamiri, H Horn, T Nomura, AD Irvine, ... Nature genetics 44 (11), 1272-1276, 2012 | 106 | 2012 |
Transcription Termination and Chimeric RNA Formation Controlled by Arabidopsis thaliana FPA C Duc, A Sherstnev, C Cole, GJ Barton, GG Simpson PLoS genetics 9 (10), e1003867, 2013 | 72 | 2013 |
A proteomic approach to analyze the aspirin-mediated lysine acetylome MH Tatham, C Cole, P Scullion, R Wilkie, NJ Westwood, LA Stark, RT Hay Molecular & Cellular Proteomics 16 (2), 310-326, 2017 | 63 | 2017 |
Aminoimidazolylmethyluracil analogues as potent inhibitors of thymidine phosphorylase and their bioreductive nitroimidazolyl prodrugs P Reigan, PN Edwards, A Gbaj, C Cole, ST Barry, KM Page, SE Ashton, ... Journal of medicinal chemistry 48 (2), 392-402, 2005 | 60 | 2005 |
Potential tumor-selective nitroimidazolylmethyluracil prodrug derivatives: inhibitors of the angiogenic enzyme thymidine phosphorylase C Cole, P Reigan, A Gbaj, PN Edwards, KT Douglas, IJ Stratford, ... Journal of medicinal chemistry 46 (2), 207-209, 2003 | 60 | 2003 |
Loss-of-function mutations in CAST cause peeling skin, leukonychia, acral punctate keratoses, cheilitis, and knuckle pads Z Lin, J Zhao, D Nitoiu, CA Scott, V Plagnol, FJD Smith, NJ Wilson, C Cole, ... The American Journal of Human Genetics 96 (3), 440-447, 2015 | 49 | 2015 |
Proteus: an R package for downstream analysis of MaxQuant output M Gierlinski, F Gastaldello, C Cole, GJ Barton BioRxiv, 416511, 2018 | 46 | 2018 |