Synthetic promoter designs enabled by a comprehensive analysis of plant core promoters T Jores, J Tonnies, T Wrightsman, ES Buckler, JT Cuperus, S Fields, ... Nature Plants 7 (6), 842-855, 2021 | 130 | 2021 |
RelocaTE2: a high resolution transposable element insertion site mapping tool for population resequencing J Chen, TR Wrightsman, SR Wessler, JE Stajich PeerJ 5, e2942, 2017 | 37 | 2017 |
A strategy for building and using a human reference pangenome B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... F1000Research 8, 1751, 2021 | 17 | 2021 |
Modeling chromatin state from sequence across angiosperms using recurrent convolutional neural networks T Wrightsman, AP Marand, PA Crisp, NM Springer, ES Buckler The Plant Genome 15 (3), e20249, 2022 | 8 | 2022 |
Predictable and stable epimutations induced during clonal plant propagation with embryonic transcription factor AT Wibowo, J Antunez-Sanchez, A Dawson, J Price, C Meehan, ... PLoS Genetics 18 (11), e1010479, 2022 | 6 | 2022 |
Arabidopsis and maize terminator strength is determined by GC content, polyadenylation motifs and cleavage probability S Gorjifard, T Jores, J Tonnies, NA Mueth, K Bubb, T Wrightsman, ... Nature Communications 15 (1), 5868, 2024 | 5 | 2024 |
Towards an unbiased characterization of genetic polymorphism A Igolkina, S Vorbrugg, F Rabanal, HJ Liu, H Ashkenazy, A Kornienko, ... bioRxiv, 2024.05. 30.596703, 2024 | 4 | 2024 |
Features that Govern Terminator Strength in Plants S Gorjifard, T Jores, J Tonnies, NA Mueth, K Bubb, T Wrightsman, ... bioRxiv, 2023.06. 16.545379, 2023 | 3 | 2023 |
Predictable and stable epimutations induced during clonal propagation with embryonic transcription factors AT Wibowo, J Antunez-Sanchez, A Dawson, J Price, C Meehan, ... bioRxiv, 2022.03. 15.484412, 2022 | 2 | 2022 |
Current genomic deep learning architectures generalize across grass species but not alleles T Wrightsman, TH Ferebee, MC Romay, AS Seetharam, ... bioRxiv, 2024.04. 11.589024, 2024 | 1 | 2024 |
Fishing for a reelGene: evaluating gene models with evolution and machine learning AJ Schulz, J Zhai, T AuBuchon-Elder, M El-Walid, TH Ferebee, ... bioRxiv, 2023.09. 19.558246, 2023 | 1 | 2023 |
RelocaTE2: a high resolution transposable element polymorphism mapping tool for population resequencing J Chen, T Wrightsman, SR Wessler, JE Stajich | 1 | 2016 |
From Arabidopsis to Zea: Learning Conserved Cis Mechanisms of Gene Regulation T Wrightsman Cornell University, 2024 | | 2024 |
Resolving the Diploid Genome of Fairchild Mandarin with Single Molecule Sequencing Technologies J Chen, R Li, SP Ferrante, TR Wrightsman, Z Jia, J Burnette, ML Roose, ... Plant and Animal Genome XXVI Conference (January 13-17, 2018), 2018 | | 2018 |
RelocaTE2: a high resolution transposable element insertion site mapping tool for J Chen, TR Wrightsman, SR Wessler PeerJ, 5 (1), 2017 | | 2017 |
Exploration of Transposable Element Families in the Novel Citrus Genome Fairchild T Wrightsman, J Chen, C Hatch, J Stajich, S Wessler Plant and Animal Genome Conference 25, P0607, 2017 | | 2017 |
A strategy for building and using a human reference pangenome [version 1; peer review: awaiting peer review] B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... | | |