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Takeshi Abe
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Multilevel modeling of physiological systems and simulation platform: physiodesigner, flint and flint k3 service
Y Asai, T Abe, M Okita, T Okuyama, N Yoshioka, S Yokoyama, M Nagaku, ...
2012 IEEE/IPSJ 12th International Symposium on Applications and the Internet …, 2012
262012
Accelerating ODE-based simulation of general and heterogeneous biophysical models using a GPU
T Okuyama, M Okita, T Abe, Y Asai, H Kitano, T Nomura, K Hagihara
IEEE Transactions on Parallel and Distributed Systems 25 (8), 1966-1975, 2013
212013
A versatile platform for multilevel modeling of physiological systems: SBML-PHML hybrid modeling and simulation
Y Asai, T Abe, H Oka, M Okita, K Hagihara, S Ghosh, Y Matsuoka, ...
Advanced Biomedical Engineering 3, 50-58, 2014
182014
An integrated genomic approach identifies HOXC8 as an upstream regulator in ovarian endometrioma
Y Mihara, R Maekawa, S Sato, N Shimizu, Y Doi-Tanaka, H Takagi, ...
The Journal of Clinical Endocrinology & Metabolism 105 (12), e4474-e4489, 2020
152020
An open platform toward large-scale multilevel modeling and simulation of physiological systems
Y Asai, H Oka, T Abe, M Okita, K Hagihara, T Nomura, H Kitano
2011 IEEE/IPSJ International symposium on applications and the internet, 250-255, 2011
142011
A versatile platform for multilevel modeling of physiological systems: template/instance framework for large-scale modeling and simulation
Y Asai, T Abe, H Oka, M Okita, T Okuyama, K Hagihara, S Ghosh, ...
2013 35th Annual International Conference of the IEEE Engineering in …, 2013
102013
Databases for multilevel biophysiology research available at Physiome. jp
Y Asai, T Abe, L Li, H Oka, T Nomura, H Kitano
Frontiers in Physiology 6, 251, 2015
92015
Estimating culprit drugs for adverse drug reactions based on Bayesian inference
K Hamada, T Abe, K Kouda, M Nakatsui, T Kitahara, K Matsunaga, Y Asai
Clinical Pharmacology & Therapeutics 113 (5), 1117-1124, 2023
42023
General-purpose simulation system using social network interface
Y Asai, T Abe, H Kitano, M Okita, S Ghosh, Y Matsuoka
US Patent App. 14/402,932, 2015
22015
Causal Interactions Among Cortical Regions During Sleep Based on fNIRS Recordings
T Abe, Y Asai, M Dotare, T Hayano, SH Perrig, M Jaquerod, A Lintas, ...
Advances in Cognitive Neurodynamics (VII) Proceedings of the Seventh …, 2021
12021
Integrative and theoretical research on the architecture of a biological system and its disorder
S Uchida, Y Asai, Y Kariya, K Tsumoto, H Hibino, M Honma, T Abe, F Nin, ...
The journal of physiological sciences 69, 433-451, 2019
12019
Factors associated with non-intervention of antifibrotic agents in IPF patients
M Asami-Noyama, K Hamada, Y Asai, T Abe, K Yonezawa, M Watanabe, ...
Respiratory Investigation 62 (6), 1124-1131, 2024
2024
Detection of quadratic phase coupling by cross-bicoherence and spectral Granger causality in bifrequencies interactions
T Abe, Y Asai, A Lintas, AEP Villa
Scientific Reports 14 (1), 8521, 2024
2024
Factors associated with non-intervention with antifibrotic agents in IPF patients
M Asami, K Hamada, T Abe, K Oishi, T Hirano, Y Asai, K Matsunaga
European Respiratory Journal 62 (suppl 67), 2023
2023
Reply to" Questioning Bayesian Inference‐Based Models for Estimating Culprit Drugs for Adverse Drug Reactions".
K Hamada, T Abe, K Kouda, M Nakatsui, T Kitahara, K Matsunaga, Y Asai
Clinical Pharmacology & Therapeutics 114 (2), 2023
2023
Flint 2.4: The User Guide
T Abe
2020
Flint: a simulator for biological and physiological models in ordinary and stochastic differential equations
T Abe, Y Asai
Journal of Open Source Software 5 (53), 2331, 2020
2020
Medicine in New Era with Artificial Intelligence and Systems Biology
Y Asai, T Abe, T Hayano
日本放射線技術学会雑誌 74 (11), 1343-1351, 2018
2018
Granger Causality to Reveal Functional Connectivity in the Mouse Basal Ganglia-Thalamocortical Circuit
A Lintas, T Abe, AEP Villa, Y Asai
Artificial Neural Networks and Machine Learning–ICANN 2018: 27th …, 2018
2018
Multilevel modeling of physiological systems on PhysioDesigner
Y Asai, T Abe, H Kitano
日本薬理学雑誌 147 (2), 114-119, 2016
2016
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