User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability PA Yushkevich, J Piven, HC Hazlett, RG Smith, S Ho, JC Gee, G Gerig Neuroimage 31 (3), 1116-1128, 2006 | 8789 | 2006 |
N4ITK: improved N3 bias correction NJ Tustison, BB Avants, PA Cook, Y Zheng, A Egan, PA Yushkevich, ... IEEE transactions on medical imaging 29 (6), 1310-1320, 2010 | 5512 | 2010 |
Multi-atlas segmentation with joint label fusion H Wang, JW Suh, SR Das, JB Pluta, C Craige, PA Yushkevich IEEE transactions on pattern analysis and machine intelligence 35 (3), 611-623, 2012 | 922 | 2012 |
The optimal template effect in hippocampus studies of diseased populations BB Avants, P Yushkevich, J Pluta, D Minkoff, M Korczykowski, J Detre, ... Neuroimage 49 (3), 2457-2466, 2010 | 675 | 2010 |
Deformable registration of diffusion tensor MR images with explicit orientation optimization H Zhang, PA Yushkevich, DC Alexander, JC Gee Medical image analysis 10 (5), 764-785, 2006 | 564 | 2006 |
Automated volumetry and regional thickness analysis of hippocampal subfields and medial temporal cortical structures in mild cognitive impairment PA Yushkevich, JB Pluta, H Wang, L Xie, SL Ding, EC Gertje, L Mancuso, ... Human brain mapping 36 (1), 258-287, 2015 | 559 | 2015 |
ITK-SNAP: An interactive tool for semi-automatic segmentation of multi-modality biomedical images PA Yushkevich, Y Gao, G Gerig 2016 38th annual international conference of the IEEE engineering in …, 2016 | 530 | 2016 |
Deformable M-Reps for 3D Medical Image Segmentation SM Pizer, PT Fletcher, S Joshi, A Thall, JZ Chen, Y Fridman, DS Fritsch, ... International journal of computer vision 55, 85-106, 2003 | 459 | 2003 |
Segmentation, registration, and measurement of shape variation via image object shape SM Pizer, DS Fritsch, PA Yushkevich, VE Johnson, EL Chaney IEEE transactions on medical imaging 18 (10), 851-865, 1999 | 440 | 1999 |
Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: towards a harmonized segmentation protocol PA Yushkevich, RSC Amaral, JC Augustinack, AR Bender, JD Bernstein, ... Neuroimage 111, 526-541, 2015 | 307 | 2015 |
High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences: an example study using amyotrophic lateral sclerosis H Zhang, BB Avants, PA Yushkevich, JH Woo, S Wang, LF McCluskey, ... IEEE transactions on medical imaging 26 (11), 1585-1597, 2007 | 282 | 2007 |
Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI PA Yushkevich, H Wang, J Pluta, SR Das, C Craige, BB Avants, ... Neuroimage 53 (4), 1208-1224, 2010 | 264 | 2010 |
Multi-atlas segmentation with joint label fusion and corrective learning—an open source implementation H Wang, PA Yushkevich Frontiers in neuroinformatics 7, 27, 2013 | 235 | 2013 |
A learning-based wrapper method to correct systematic errors in automatic image segmentation: consistently improved performance in hippocampus, cortex and brain segmentation H Wang, SR Das, JW Suh, M Altinay, J Pluta, C Craige, B Avants, ... NeuroImage 55 (3), 968-985, 2011 | 229 | 2011 |
Structure-specific statistical mapping of white matter tracts PA Yushkevich, H Zhang, TJ Simon, JC Gee Visualization and Processing of Tensor Fields: Advances and Perspectives, 83-112, 2009 | 206 | 2009 |
Multiscale deformable model segmentation and statistical shape analysis using medial descriptions S Joshi, S Pizer, PT Fletcher, P Yushkevich, A Thall, JS Marron IEEE transactions on medical imaging 21 (5), 538-550, 2002 | 200 | 2002 |
A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T PA Yushkevich, BB Avants, J Pluta, S Das, D Minkoff, ... Neuroimage 44 (2), 385-398, 2009 | 194 | 2009 |
Cancer imaging phenomics toolkit: quantitative imaging analytics for precision diagnostics and predictive modeling of clinical outcome C Davatzikos, S Rathore, S Bakas, S Pati, M Bergman, R Kalarot, ... Journal of medical imaging 5 (1), 011018-011018, 2018 | 190 | 2018 |
Characterizing the human hippocampus in aging and Alzheimer’s disease using a computational atlas derived from ex vivo MRI and histology DH Adler, LEM Wisse, R Ittyerah, JB Pluta, SL Ding, L Xie, J Wang, ... Proceedings of the National Academy of Sciences 115 (16), 4252-4257, 2018 | 166 | 2018 |
Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI DH Adler, J Pluta, S Kadivar, C Craige, JC Gee, BB Avants, ... Neuroimage 84, 505-523, 2014 | 164 | 2014 |