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alexandra louis
alexandra louis
Ingénieure de Recherche, CNRS,Institut de Biologie de Ecole Normale Supérieure
在 bio.ens.psl.eu 的电子邮件经过验证 - 首页
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The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
C Berthelot, F Brunet, D Chalopin, A Juanchich, M Bernard, B Noël, ...
Nature communications 5 (1), 1-10, 2014
9442014
Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate
F Denoeud, S Henriet, S Mungpakdee, JM Aury, C Da Silva, H Brinkmann, ...
Science 330 (6009), 1381-1385, 2010
3092010
Amphioxus functional genomics and the origins of vertebrate gene regulation
F Marlétaz, PN Firbas, I Maeso, JJ Tena, O Bogdanovic, M Perry, ...
Nature, 1, 2018
2342018
Genomicus: a database and a browser to study gene synteny in modern and ancestral genomes
M Muffato, A Louis, CE Poisnel, HR Crollius
Bioinformatics 26 (8), 1119-1121, 2010
2312010
Chromosome evolution at the origin of the ancestral vertebrate genome
C Sacerdot, A Louis, C Bon, C Berthelot, H Roest Crollius
Genome biology 19, 1-15, 2018
1762018
Genomicus: five genome browsers for comparative genomics in eukaryota
A Louis, M Muffato, HR Crollius
Nucleic acids research 41 (D1), D700-D705, 2013
1652013
Understanding Brassicaceae evolution through ancestral genome reconstruction
F Murat, A Louis, F Maumus, A Armero, R Cooke, H Quesneville, ...
Genome biology 16, 1-17, 2015
1112015
Genomicus update 2015: KaryoView and MatrixView provide a genome-wide perspective to multispecies comparative genomics
A Louis, NTT Nguyen, M Muffato, H Roest Crollius
Nucleic acids research 43 (D1), D682-D689, 2015
1102015
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets
M Brozovic, C Dantec, J Dardaillon, D Dauga, E Faure, M Gineste, ...
Nucleic acids research 46 (D1), D718-D725, 2018
1072018
Genomicus 2018: karyotype evolutionary trees and on-the-fly synteny computing
NTT Nguyen, P Vincens, H Roest Crollius, A Louis
Nucleic acids research 46 (D1), D816-D822, 2018
1052018
Identification of genomic features using microsyntenies of domains: domain teams
S Pasek, A Bergeron, JL Risler, A Louis, E Ollivier, M Raffinot
Genome research 15 (6), 867-874, 2005
672005
The bowfin genome illuminates the developmental evolution of ray-finned fishes
AW Thompson, MB Hawkins, E Parey, DJ Wcisel, T Ota, K Kawasaki, ...
Nature Genetics 53 (9), 1373-1384, 2021
582021
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates
J Dardaillon, D Dauga, P Simion, E Faure, TA Onuma, MB DeBiasse, ...
Nucleic acids research 48 (D1), D668-D675, 2020
462020
How much does the amphioxus genome represent the ancestor of chordates?
A Louis, H Roest Crollius, M Robinson-Rechavi
Briefings in functional genomics 11 (2), 89-95, 2012
462012
Genomicus in 2022: comparative tools for thousands of genomes and reconstructed ancestors
NTT Nguyen, P Vincens, JF Dufayard, H Roest Crollius, A Louis
Nucleic Acids Research 50 (D1), D1025-D1031, 2022
452022
An atlas of fish genome evolution reveals delayed rediploidization following the teleost whole-genome duplication
E Parey, A Louis, J Montfort, Y Guiguen, HR Crollius, C Berthelot
Genome Research 32 (9), 1685-1697, 2022
372022
Genome structures resolve the early diversification of teleost fishes
E Parey, A Louis, J Montfort, O Bouchez, C Roques, C Iampietro, J Lluch, ...
Science 379 (6632), 572-575, 2023
352023
Long-range evolutionary constraints reveal cis-regulatory interactions on the human X chromosome
M Naville, M Ishibashi, M Ferg, H Bengani, S Rinkwitz, M Krecsmarik, ...
Nature communications 6 (1), 6904, 2015
352015
Synteny-guided resolution of gene trees clarifies the functional impact of whole-genome duplications
E Parey, A Louis, C Cabau, Y Guiguen, H Roest Crollius, C Berthelot
Molecular biology and evolution 37 (11), 3324-3337, 2020
332020
Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom
M Muffato, A Louis, NTT Nguyen, J Lucas, C Berthelot, H Roest Crollius
Nature Ecology & Evolution 7 (3), 355-366, 2023
252023
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