| A unified coarse-grained model of biological macromolecules based on mean-field multipole–multipole interactions A Liwo, M Baranowski, C Czaplewski, E Gołaś, Y He, D Jagieła, P Krupa, ... Journal of molecular modeling 20, 1-15, 2014 | 143 | 2014 |
| Mean-field interactions between nucleic-acid-base dipoles can drive the formation of the double helix Y He, M Maciejczyk, S Ołdziej, HA Scheraga, A Liwo Physical Review Letters 110 (9), 098101, 2013 | 87 | 2013 |
| Coarse-grained force field: general folding theory A Liwo, Y He, HA Scheraga Physical Chemistry Chemical Physics 13 (38), 16890-16901, 2011 | 86 | 2011 |
| WeFold: a coopetition for protein structure prediction GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ... Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014 | 74 | 2014 |
| Conformational rearrangements in the pro-apoptotic protein, Bax, as it inserts into mitochondria: a cellular death switch RF Gahl, Y He, S Yu, N Tjandra Journal of Biological Chemistry 289 (47), 32871-32882, 2014 | 72 | 2014 |
| Exploring the parameter space of the coarse‐grained UNRES force field by random search: Selecting a transferable medium‐resolution force field Y He, Y Xiao, A Liwo, HA Scheraga Journal of computational chemistry 30 (13), 2127-2135, 2009 | 70 | 2009 |
| Lessons from application of the UNRES force field to predictions of structures of CASP10 targets Y He, MA Mozolewska, P Krupa, AK Sieradzan, TK Wirecki, A Liwo, ... Proceedings of the National Academy of Sciences 110 (37), 14936-14941, 2013 | 69 | 2013 |
| Performance of protein-structure predictions with the physics-based UNRES force field in CASP11 P Krupa, MA Mozolewska, M Wiśniewska, Y Yin, Y He, AK Sieradzan, ... Bioinformatics 32 (21), 3270-3278, 2016 | 49 | 2016 |
| PDZ binding to the BAR domain of PICK1 is elucidated by coarse-grained molecular dynamics Y He, A Liwo, H Weinstein, HA Scheraga Journal of molecular biology, 2010 | 49 | 2010 |
| AlphaFold illuminates half of the dark human proteins JL Binder, J Berendzen, AO Stevens, Y He, J Wang, NV Dokholyan, ... Current opinion in structural biology 74, 102372, 2022 | 48 | 2022 |
| Benchmarking the accuracy of AlphaFold 2 in loop structure prediction AO Stevens, Y He Biomolecules 12 (7), 985, 2022 | 44 | 2022 |
| Folding mechanism of beta-hairpin trpzip2: Heterogeneity, transition state and folding pathways Y Xiao, C Chen, Y He International journal of molecular sciences 10 (6), 2838-2848, 2009 | 42 | 2009 |
| High cell density production of Deinococcus radiodurans under optimized conditions Y He Journal of Industrial Microbiology and Biotechnology 36 (4), 539-546, 2009 | 39 | 2009 |
| Optimization of a Nucleic Acids united-RESidue 2-Point model (NARES-2P) with a maximum-likelihood approach Y He, A Liwo, HA Scheraga The Journal of Chemical Physics 143 (24), 2015 | 28 | 2015 |
| A polymer electrolyte with high cationic transport number for safe and stable solid Li-metal batteries X Shan, M Morey, Z Li, S Zhao, S Song, Z Xiao, H Feng, S Gao, G Li, ... ACS Energy Letters 7 (12), 4342-4351, 2022 | 27 | 2022 |
| Sequence-, structure-, and dynamics-based comparisons of structurally homologous CheY-like proteins Y He, GG Maisuradze, Y Yin, K Kachlishvili, S Rackovsky, HA Scheraga Proceedings of the National Academy of Sciences 114 (7), 1578-1583, 2017 | 24 | 2017 |
| An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ... Scientific reports 8 (1), 9939, 2018 | 23 | 2018 |
| Unraveling the role of neutral units for single-ion conducting polymer electrolytes S Zhao, S Song, Y Wang, J Keum, J Zhu, Y He, AP Sokolov, PF Cao ACS Applied Materials & Interfaces 13 (43), 51525-51534, 2021 | 19 | 2021 |
| A new protein nucleic‐acid coarse‐grained force field based on the UNRES and NARES‐2P force fields AK Sieradzan, A Giełdoń, Y Yin, Y He, HA Scheraga, A Liwo Journal of computational chemistry 39 (28), 2360-2370, 2018 | 19 | 2018 |
| Physics-based potentials for coarse-grained modeling of protein–DNA interactions Y Yin, AK Sieradzan, A Liwo, Y He, HA Scheraga Journal of chemical theory and computation 11 (4), 1792-1808, 2015 | 19 | 2015 |
Adam LiwoUniversity of Gdańsk在 ug.edu.pl 的电子邮件经过验证
