Estimation of an inter-rater intra-class correlation coefficient that overcomes common assumption violations in the assessment of health measurement scales CA Bobak, PJ Barr, AJ O’Malley BMC medical research methodology 18, 1-11, 2018 | 230 | 2018 |
Distinct features and functions of systemic and mucosal humoral immunity among SARS-CoV-2 convalescent individuals SE Butler, AR Crowley, H Natarajan, S Xu, JA Weiner, CA Bobak, ... Frontiers in immunology 11, 618685, 2021 | 103 | 2021 |
Exhaled human breath analysis in active pulmonary tuberculosis diagnostics by comprehensive gas chromatography-mass spectrometry and chemometric techniques M Beccaria, C Bobak, B Maitshotlo, TR Mellors, G Purcaro, FA Franchina, ... Journal of breath research 13 (1), 016005, 2018 | 83 | 2018 |
Boosting of cross-reactive antibodies to endemic coronaviruses by SARS-CoV-2 infection but not vaccination with stabilized spike AR Crowley, H Natarajan, AP Hederman, CA Bobak, JA Weiner, ... Elife 11, e75228, 2022 | 41 | 2022 |
Comparison of common machine learning models for classification of tuberculosis using transcriptional biomarkers from integrated datasets CA Bobak, AJ Titus, JE Hill Applied Soft Computing 74, 264-273, 2019 | 34 | 2019 |
A large-scale internal validation study of unsupervised virtual trichrome staining technologies on nonalcoholic steatohepatitis liver biopsies JJ Levy, N Azizgolshani, MJ Andersen Jr, A Suriawinata, X Liu, ... Modern Pathology 34 (4), 808-822, 2021 | 32 | 2021 |
A New Dimension of Breast Cancer Epigenetics - Applications of Variational Autoencoders with DNA Methylation AJ Titus, CA Bobak, BC Christensen Proceedings of the 11th International Joint Conference on Biomedical …, 2018 | 30* | 2018 |
Breath can discriminate tuberculosis from other lower respiratory illness in children CA Bobak, L Kang, L Workman, L Bateman, MS Khan, M Prins, L May, ... Scientific Reports 11 (1), 2704, 2021 | 29 | 2021 |
An unsupervised deep learning framework with variational autoencoders for genome-wide dna methylation analysis and biologic feature extraction applied to breast cancer AJ Titus, OM Wilkins, CA Bobak, BC Christensen BioRxiv, 433763, 2018 | 25* | 2018 |
Increased DNA methylation, cellular senescence and premature epigenetic aging in guinea pigs and humans with tuberculosis CA Bobak, H Natarajan, T Gandhi, SL Grimm, T Nishiguchi, K Koster, ... Aging (albany NY) 14 (5), 2174, 2022 | 17 | 2022 |
Egocentric social networks and smoking among adults with serious mental illness KA Aschbrenner, C Bobak, EJ Schneider, JA Naslund, MF Brunette, ... Translational behavioral medicine 8 (4), 531-539, 2018 | 17 | 2018 |
Mixed effects machine learning models for colon cancer metastasis prediction using spatially localized immuno-oncology markers JJ Levy, CA Bobak, M Nasir-Moin, EM Veziroglu, SM Palisoul, RE Barney, ... PACIFIC SYMPOSIUM ON BIOCOMPUTING 2022, 175-186, 2021 | 13 | 2021 |
Assessment of imputation methods for missing gene expression data in meta-analysis of distinct cohorts of tuberculosis patients CA Bobak, L McDonnell, MD Nemesure, J Lin, JE Hill PACIFIC SYMPOSIUM ON BIOCOMPUTING 2020, 307-318, 2019 | 10 | 2019 |
Investigating Random Forest Classification on Publicly Available Tuberculosis Data to Uncover Robust Transcriptional Biomarkers CA Bobak, AJ Titus, JE Hill Proceedings of the 11th International Joint Conference on Biomedical …, 2018 | 5 | 2018 |
Association between regional brain volumes and BMI z-score change over one year in children TD Masterson, C Bobak, KM Rapuano, GE Shearrer, D Gilbert-Diamond Plos one 14 (9), e0221995, 2019 | 4 | 2019 |
Raising the stakeholders: Improving patient outcomes through interprofessional collaborations in AI for healthcare CA Bobak, M Svoboda, KA Giffin, DP Wall, J Moore BIOCOMPUTING 2021: Proceedings of the Pacific Symposium, 351-355, 2020 | 3 | 2020 |
Modelling an aquaponic ecosystem using ordinary differential equations C Bobak, H Kunze Mathematical and computational approaches in advancing modern science and …, 2016 | 3 | 2016 |
Gene expression in cord blood and tuberculosis in early childhood: A nested case-control study in a South African birth cohort CA Bobak, M Botha, L Workman, JE Hill, MP Nicol, JW Holloway, DJ Stein, ... Clinical Infectious Diseases 77 (3), 438-449, 2023 | 2 | 2023 |
Application of Quantile Discretization and Bayesian Network Analysis to Publicly Available Cystic Fibrosis Data Sets KF Fukutani, TH Hampton, CA Bobak, TA MacKenzie, BA Stanton PACIFIC SYMPOSIUM ON BIOCOMPUTING 2024, 534-548, 2023 | 2 | 2023 |
Bridge Category Models: Development of Bayesian Modelling Procedures to Account for Bridge Ordinal Ratings for Disease Staging J Levy, C Bobak, N Azizgolshani, M Andersen Jr, A Suriawinata, X Liu, ... biorxiv, 2021.08. 17.456726, 2021 | 2 | 2021 |