Electrochemical preparation of CdSe nanowire arrays D Xu, X Shi, G Guo, L Gui, Y Tang The Journal of Physical Chemistry B 104 (21), 5061-5063, 2000 | 231 | 2000 |
Preparation of II-VI group semiconductor nanowire arrays by dc electrochemical deposition in porous aluminum oxide templates D Xu, D Chen, Y Xu, X Shi, G Guo, L Gui, Y Tang Pure and applied chemistry 72 (1-2), 127-135, 2000 | 161 | 2000 |
Computational design of three-dimensional RNA structure and function JD Yesselman, D Eiler, ED Carlson, MR Gotrik, AE d’Aquino, AN Ooms, ... Nature nanotechnology 14 (9), 866-873, 2019 | 72 | 2019 |
Structural ensemble and microscopic elasticity of freely diffusing DNA by direct measurement of fluctuations X Shi, D Herschlag, PAB Harbury Proceedings of the National Academy of Sciences 110 (16), E1444-E1451, 2013 | 59 | 2013 |
The solution structural ensembles of RNA kink-turn motifs and their protein complexes X Shi, L Huang, DMJ Lilley, PB Harbury, D Herschlag Nature chemical biology 12 (3), 146-152, 2016 | 44 | 2016 |
From a structural average to the conformational ensemble of a DNA bulge X Shi, KA Beauchamp, PB Harbury, D Herschlag Proceedings of the National Academy of Sciences 111 (15), E1473-E1480, 2014 | 42 | 2014 |
Probing the dynamics of the P1 helix within the Tetrahymena group I intron X Shi, ET Mollova, G Pljevaljcic, DP Millar, D Herschlag Journal of the American Chemical Society 131 (27), 9571-9578, 2009 | 26 | 2009 |
Fluorescence polarization anisotropy to measure RNA dynamics X Shi, D Herschlag Methods in enzymology 469, 287-302, 2009 | 26 | 2009 |
Determination of the conformational ensemble of the TAR RNA by X-ray scattering interferometry X Shi, P Walker, PB Harbury, D Herschlag Nucleic acids research 45 (8), e64-e64, 2017 | 24 | 2017 |
Volume and hydration changes of DNA–ligand interactions X Shi, RB Macgregor Jr Biophysical chemistry 125 (2-3), 471-482, 2007 | 24 | 2007 |
Quantifying nucleic acid ensembles with X-ray scattering interferometry X Shi, S Bonilla, D Herschlag, P Harbury Methods in Enzymology 558, 75-97, 2015 | 17 | 2015 |
Roles of Long-Range Tertiary Interactions in Limiting Dynamics of the Tetrahymena Group I Ribozyme X Shi, N Bisaria, TL Benz-Moy, S Bonilla, DS Pavlichin, D Herschlag Journal of the American Chemical Society 136 (18), 6643-6648, 2014 | 17 | 2014 |
The structural ensemble of a Holliday junction determined by X-ray scattering interference T Zettl, X Shi, S Bonilla, SM Sedlak, J Lipfert, D Herschlag Nucleic acids research 48 (14), 8090-8098, 2020 | 16 | 2020 |
A single-stranded junction modulates nanosecond motional ordering of the substrate recognition duplex of a group I ribozyme P Nguyen, X Shi, ST Sigurdsson, D Herschlag, PZ Qin Chembiochem: a European journal of chemical biology 14 (14), 2013 | 14 | 2013 |
Temperature dependence of the volumetric parameters of drug binding to poly [d (AT)]· Poly [d (AT)] and Poly (dA)· Poly (dT) X Shi, RB Macgregor Jr Biophysical journal 90 (5), 1729-1738, 2006 | 11 | 2006 |
Gold nanocrystal labels provide a sequence–to–3D structure map in SAXS reconstructions T Zettl, RS Mathew, X Shi, S Doniach, D Herschlag, PAB Harbury, J Lipfert Science Advances 4 (5), eaar4418, 2018 | 10 | 2018 |
A role for a single-stranded junction in RNA binding and specificity by the Tetrahymena group I ribozyme X Shi, SV Solomatin, D Herschlag Journal of the American Chemical Society 134 (4), 1910-1913, 2012 | 9 | 2012 |
The effect of charge on the volume change of DNA binding with intercalator DAPP X Shi, RB Macgregor Jr The Journal of Physical Chemistry B 111 (13), 3321-3324, 2007 | 8 | 2007 |
Recording and Analyzing Nucleic Acid Distance Distributions with X‐Ray Scattering Interferometry (XSI) T Zettl, R Das, PAB Harbury, D Herschlag, J Lipfert, RS Mathew, X Shi Current protocols in nucleic acid chemistry 73 (1), e54, 2018 | 7 | 2018 |
Computational design of asymmetric three-dimensional RNA structures and machines JD Yesselman, D Eiler, ED Carlson, AN Ooms, W Kladwang, X Shi, ... BioRxiv, 223479, 2017 | 6 | 2017 |