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Toshimichi Yamada
Toshimichi Yamada
在 ucsf.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli
K Imamura, N Imamachi, G Akizuki, M Kumakura, A Kawaguchi, K Nagata, ...
Molecular cell 53 (3), 393-406, 2014
6932014
Visualization of nonengineered single mRNAs in living cells using genetically encoded fluorescent probes
T Yamada, H Yoshimura, A Inaguma, T Ozawa
Analytical chemistry 83 (14), 5708-5714, 2011
832011
Fluorescent probes for imaging endogenous β-actin mRNA in living cells using fluorescent protein-tagged pumilio
H Yoshimura, A Inaguma, T Yamada, T Ozawa
ACS chemical biology 7 (6), 999-1005, 2012
672012
Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs
K Imamura, A Takaya, Y Ishida, Y Fukuoka, T Taya, R Nakaki, M Kakeda, ...
The EMBO journal 37 (13), e97723, 2018
662018
Contributions of regulated transcription and mRNA decay to the dynamics of gene expression
T Yamada, N Akimitsu
Wiley Interdisciplinary Reviews: RNA 10 (1), e1508, 2019
392019
Ratiometric bioluminescence indicators for monitoring cyclic adenosine 3′, 5′-monophosphate in live cells based on luciferase-fragment complementation
M Takeuchi, Y Nagaoka, T Yamada, H Takakura, T Ozawa
Analytical chemistry 82 (22), 9306-9313, 2010
352010
Spatiotemporal analysis with a genetically encoded fluorescent RNA probe reveals TERRA function around telomeres
T Yamada, H Yoshimura, R Shimada, M Hattori, M Eguchi, TK Fujiwara, ...
Scientific Reports 6 (1), 38910, 2016
312016
Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates
K Kawata, H Wakida, T Yamada, K Taniue, H Han, M Seki, Y Suzuki, ...
Genome Research 30 (10), 1481-1491, 2020
272020
Development of red-shifted mutants derived from luciferase of Brazilian click beetle Pyrearinus termitilluminans
T Nishiguchi, T Yamada, Y Nasu, M Ito, H Yoshimura, T Ozawa
Journal of biomedical optics 20 (10), 101205-101205, 2015
262015
Systematic analysis of targets of pumilio-mediated mRNA decay reveals that PUM1 repression by DNA damage activates translesion synthesis
T Yamada, N Imamachi, K Imamura, K Taniue, T Kawamura, Y Suzuki, ...
Cell Reports 31 (5), 2020
232020
Harnessing synthetic biology to engineer organoids and tissues
C Trentesaux, T Yamada, OD Klein, WA Lim
Cell Stem Cell 30 (1), 10-19, 2023
192023
5′-Bromouridine IP Chase (BRIC)-Seq to Determine RNA Half-Lives
T Yamada, N Imamachi, R Onoguchi-Mizutani, K Imamura, Y Suzuki, ...
Methods in Molecular Biology 1720, 1-13, 2018
152018
Interplay between transcription and RNA degradation
T Yamada, M Nagahama, N Akimitsu
Gene Expression and Regulation in Mammalian Cells—Transcription From …, 2018
102018
SINGLE-MOLECULE LIVE-CELL IMAGING OF A NON-CODING RNA
H Yoshimura, T Yamada, R Shimada, T Ozawa
Chem. Biol 7, 999-1005, 2012
72012
Techniques for analyzing genome-wide expression of non-coding RNA
R Onoguchi-Mizutani, K Taniue, K Kawata, T Yamada, N Akimitsu
Handbook of Epigenetics, 163-184, 2023
12023
Systematic analysis of targets of Pumilio (PUM)-mediated mRNA decay identifies a role of PUM1 in regulating DNA damage response pathway
T Yamada, N Imamachi, K Imamura, T Kawamura, Y Suzuki, ...
bioRxiv, 387381, 2018
12018
Techniques for Genome-Wide Expression Analysis of Noncoding RNA
NA Rena Mizutani, Toshimichi Yamada
Handbook of Epigenetics (Second Edition) 11, 153-165, 2017
1*2017
Repression of PUM1-mediated mRNA decay activates translesion synthesis after DNA damage
T Yamada, X Sun, N Akimitsu
Molecular & Cellular Oncology 7 (6), 1812868, 2020
2020
Metabolic labeling of RNA using multiple ribonucleoside analogs enables simultaneous evaluation of transcription and degradation rates
K Kawata, H Wakida, T Yamada, K Taniue, H Han, M Seki, Y Suzuki, ...
bioRxiv, 2020.03. 06.980250, 2020
2020
Identifying functional targets reveals that inhibition of Pumilio-mediated mRNA decay increases cell resistance to DNA damage.
T Yamada, N Akimitsu, M Nagahama
MOLECULAR BIOLOGY OF THE CELL 29 (26), 283-284, 2018
2018
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