| snoDB: an interactive database of human snoRNA sequences, abundance and interactions P Bouchard-Bourelle, C Desjardins-Henri, D Mathurin-St-Pierre, ... Nucleic acids research 48 (D1), D220-D225, 2020 | 101 | 2020 |
| Handling multi-mapped reads in RNA-seq G Deschamps-Francoeur, J Simoneau, MS Scott Computational and structural biotechnology journal 18, 1569-1576, 2020 | 86 | 2020 |
| Simultaneous sequencing of coding and noncoding RNA reveals a human transcriptome dominated by a small number of highly expressed noncoding genes V Boivin, G Deschamps-Francoeur, S Couture, RM Nottingham, ... Rna 24 (7), 950-965, 2018 | 78 | 2018 |
| Protein coding genes as hosts for noncoding RNA expression V Boivin, G Deschamps-Francoeur, MS Scott Seminars in cell & developmental biology 75, 3-12, 2018 | 65 | 2018 |
| Identification of discrete classes of small nucleolar RNA featuring different ends and RNA binding protein dependency G Deschamps-Francoeur, D Garneau, F Dupuis-Sandoval, A Roy, ... Nucleic Acids Research 42 (15), 10073-10085, 2014 | 48 | 2014 |
| CoCo: RNA-seq read assignment correction for nested genes and multimapped reads G Deschamps-Francoeur, V Boivin, S Abou Elela, MS Scott Bioinformatics 35 (23), 5039-5047, 2019 | 41 | 2019 |
| snoDB 2.0: an enhanced interactive database, specializing in human snoRNAs D Bergeron, H Paraqindes, É Fafard-Couture, G Deschamps-Francoeur, ... Nucleic Acids Research 51 (D1), D291-D296, 2023 | 32 | 2023 |
| High-grade ovarian cancer associated H/ACA snoRNAs promote cancer cell proliferation and survival L Faucher-Giguère, A Roy, G Deschamps-Francoeur, S Couture, ... NAR cancer 4 (1), zcab050, 2022 | 18 | 2022 |
| Intronic small nucleolar RNAs regulate host gene splicing through base pairing with their adjacent intronic sequences D Bergeron, L Faucher-Giguère, AK Emmerichs, K Choquet, KS Song, ... Genome Biology 24 (1), 160, 2023 | 16 | 2023 |
| SnoRNA copy regulation affects family size, genomic location and family abundance levels D Bergeron, C Laforest, S Carpentier, A Calvé, É Fafard-Couture, ... BMC genomics 22 (1), 414, 2021 | 16 | 2021 |
| The snoGloBe interaction predictor reveals a broad spectrum of C/D snoRNA RNA targets G Deschamps-Francoeur, S Couture, S Abou-Elela, MS Scott Nucleic acids research 50 (11), 6067-6083, 2022 | 10 | 2022 |
| Profiling the polyadenylated transcriptome of extracellular vesicles with long-read nanopore sequencing JCA Padilla, S Barutcu, L Malet, G Deschamps-Francoeur, V Calderon, ... BMC genomics 24 (1), 564, 2023 | 9 | 2023 |
| Kunjin Virus, Zika Virus, and Yellow Fever Virus Infections Have Distinct Effects on the Coding Transcriptome and Proteome of Brain-Derived U87 Cells C Brand, G Deschamps-Francoeur, KM Bullard-Feibelman, MS Scott, ... Viruses 15 (7), 1419, 2023 | 4 | 2023 |
| Bâtir les outils informatiques pour faciliter l'étude des petits ARN nucléolaires à grande échelle G Deschamps-Francoeur Université de Sherbrooke, 2022 | | 2022 |
| The snoGloBe interaction predictor enables a broader study of box C/D snoRNA functions and mechanisms G Deschamps-Francoeur, S Couture, S Abou-Elela, MS Scott | | |
