| Network-Based Metabolism-Centered Screening of Potential Drug Targets in Klebsiella pneumoniae at Genome Scale MF Cesur, B Siraj, R Uddin, S Durmuş, T Çakır Frontiers in cellular and infection microbiology 9, 447, 2020 | 40 | 2020 |
| Systems biology modeling to study pathogen–host interactions MF Cesur, S Durmuş Host-Pathogen Interactions: Methods and Protocols, 97-112, 2018 | 11 | 2018 |
| Computational systems biology of metabolism in infection MF Cesur, E Abdik, Ü Güven-Gülhan, S Durmuş, T Çakır Metabolic interaction in infection, 235-282, 2018 | 8 | 2018 |
| Genome-Wide Analysis of Yeast Metabolic Cycle through Metabolic Network Models Reveals Superiority of Integrated ATAC-seq Data over RNA-seq Data MF Cesur, T Çakır, P Pir Msystems 7 (3), e01347-21, 2022 | 6 | 2022 |
| A new metabolic model of Drosophila melanogaster and the integrative analysis of Parkinson’s disease MF Cesur, A Basile, KR Patil, T Çakır Life Science Alliance 6 (8), 2023 | 3 | 2023 |
| A genome-scale metabolic model of Drosophila melanogaster for integrative analysis of brain diseases MF Cesur, KR Patil, T Çakır bioRxiv, 2022.08. 22.504778, 2022 | 1 | 2022 |
| Comparative Proteomics Highlights that GenX Exposure Leads to Metabolic Defects and Inflammation in Astrocytes A Abu-Salah, MF Cesur, A Anchan, M Ay, MR Langley, A Shah, ... Environmental Science & Technology 58 (46), 20525-20539, 2024 | | 2024 |
| A benchmark of RNA-seq data normalization methods for transcriptome mapping on human genome-scale metabolic networks HB Lüleci, D Uzuner, MF Cesur, A İlgün, E Düz, E Abdik, R Odongo, ... npj Systems Biology and Applications 10 (1), 124, 2024 | | 2024 |
