| Renewable methanol and formate as microbial feedstocks CAR Cotton, NJ Claassens, S Benito-Vaquerizo, A Bar-Even Current Opinion in Biotechnology 62, 168-180, 2020 | 296 | 2020 |
| Modeling a co-culture of Clostridium autoethanogenum and Clostridium kluyveri to increase syngas conversion to medium-chain fatty-acids S Benito-Vaquerizo, M Diender, IP Olm, VAPM Dos Santos, PJ Schaap, ... Computational and Structural Biotechnology Journal 18, 3255-3266, 2020 | 44 | 2020 |
| A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia WT Scott Jr, S Benito-Vaquerizo, J Zimmermann, D Bajić, A Heinken, ... PLoS Computational Biology 19 (8), e1011363, 2023 | 25 | 2023 |
| Engineered synthetic one-carbon fixation exceeds yield of the Calvin Cycle B Dronsella, E Orsi, S Benito-Vaquerizo, T Glatter, A Bar-Even, TJ Erb, ... bioRxiv, 2022.10. 19.512895, 2022 | 12 | 2022 |
| Model-driven approach for the production of butyrate from CO2/H2 by a novel co-culture of C. autoethanogenum and C. beijerinckii S Benito-Vaquerizo, N Nouse, PJ Schaap, J Hugenholtz, S Brul, ... Frontiers in Microbiology 13, 1064013, 2022 | 11 | 2022 |
| Genome-scale metabolic modelling enables deciphering ethanol metabolism via the acrylate pathway in the propionate-producer Anaerotignum neopropionicum S Benito-Vaquerizo, I Parera Olm, T de Vroet, PJ Schaap, DZ Sousa, ... Microbial Cell Factories 21 (1), 116, 2022 | 11 | 2022 |
| standard-GEM: standardization of open-source genome-scale metabolic models M Anton, E Almaas, R Benfeitas, S Benito-Vaquerizo, LM Blank, A Dräger, ... bioRxiv, 2023.03. 21.512712, 2023 | 8 | 2023 |
| FROG analysis ensures the reproducibility of genome scale metabolic models K Raman, M Kratochvil, BG Olivier, M Konig, P Sengupta, DKK Baskaran, ... bioRxiv, 2024.09. 24.614797, 2024 | 1 | 2024 |
| Model-driven approach for the production of butyrate from CO2/H2by a novel co-culture ofC. autoethanogenumandC. beijerinckii S Benito-Vaquerizo, N Nouse, PJ Schaap, J Hugenholtz, S Brul, ... | 1 | 2022 |
| System-level characterization of engineered and evolved formatotrophic E. coli strains S Yilmaz, B Kanis, R Hogers, S Benito-Vaquerizo, J Kahnt, T Glatter, ... bioRxiv, 2024.11. 11.622960, 2024 | | 2024 |
| standard-GEM: standardization of open-source genome-scale metabolic models A Dräger, A Mihail, E Almaas, R Benfeitas, S Benito-Vaquerizo, LM Blank, ... bio Rxiv, 2023 | | 2023 |
| Genome-scale metabolic modelling enables deciphering ethanol metabolism via the acrylatepathway in the propionate-producer Anaerotignum neopropionicum M Suarez-Diez, S Benito-Vaquerizo, I Parera-Olm, T de Vroet, PJ Schaap, ... | | 2022 |
| Modeling a co-culture ofClostridium autoethanogenumandClostridium kluyverito increase syngas conversion to medium-chain fatty-acids S Benito-Vaquerizo, M Diender, IP Olm, VM dos Santos, PJ Schaap, ... | | 2020 |
| Model-driven design of synthetic microbial communities for the upcycling of One-Carbon feedstocks S Benito Vaquerizo, VAP Martins dos Santos Wageningen University, 0 | | |
| ANEO-GEM: The consensus genome-scale metabolic model of Anaerotignum neopropionicum S Benito-Vaquerizo, I Parera Olm, T de Vroet, PJ Schaap, DZ Sousa, ... Wageningen University & Research, 0 | | |
