Four-Core Genotypes mice harbour a 3.2 MB XY translocation that perturbs Tlr7 dosage J Panten, SD Prete, JP Cleland, LM Saunders, J van Riet, A Schneider, ... bioRxiv, 2023.12. 04.569933, 2023 | 2 | 2023 |
mFast‐SeqS‐based aneuploidy score in circulating cell‐free DNA is a prognostic biomarker in prostate cancer KT Isebia, B Mostert, T Deger, J Kraan, V de Weerd, E Oomen‐de Hoop, ... Molecular Oncology 17 (9), 1898-1907, 2023 | 1 | 2023 |
Predicting response to enzalutamide and abiraterone in metastatic prostate cancer using whole-omics machine learning AC de Jong, A Danyi, J van Riet, R de Wit, M Sjöström, F Feng, ... Nature Communications 14 (1), 1968, 2023 | 3 | 2023 |
Tobacco smoking-related mutational signatures in classifying smoking-associated and nonsmoking-associated NSCLC SM Ernst, JM Mankor, J van Riet, JH von der Thüsen, HJ Dubbink, ... Journal of Thoracic Oncology 18 (4), 487-498, 2023 | 27 | 2023 |
A Compendium of AR Splice Variants in Metastatic Castration-Resistant Prostate Cancer KT Isebia, MP Lolkema, G Jenster, R de Wit, JWM Martens, J van Riet International Journal of Molecular Sciences 24 (6), 6009, 2023 | 1 | 2023 |
Identifying somatic changes in drug transporters using whole genome and transcriptome sequencing data of advanced tumors WS van de Geer, RHJ Mathijssen, J van Riet, N Steeghs, M Labots, ... Biomedicine & Pharmacotherapy 159, 114210, 2023 | 1 | 2023 |
Identifying somatic changes in drug transporters using whole genome and transcriptome sequencing data of advanced tumors WS Geer, RHJ Mathijssen, J Riet, N Steeghs, M Labots, CML van Herpen, ... | | 2023 |
Katdetectr: an R/bioconductor package utilizing unsupervised changepoint analysis for robust kataegis detection DM Hazelaar, J van Riet, Y Hoogstrate, HJG van de Werken GigaScience 12, giad081, 2023 | 3 | 2023 |
CABA-V7: a prospective biomarker selected trial of cabazitaxel treatment in AR-V7 positive prostate cancer patients KT Isebia, B Mostert, BPS Belderbos, SAJ Buck, JCA Helmijr, J Kraan, ... European Journal of Cancer 177, 33-44, 2022 | 9 | 2022 |
Germline determinants of the prostate tumor genome KE Houlahan, J Yuan, T Schwarz, J Livingstone, NS Fox, W Jaratlerdsiri, ... bioRxiv, 2022.11. 16.516773, 2022 | | 2022 |
Spliceosome Inhibition in SF3B1-Mutated Uveal Melanoma JQN Nguyen, W Drabarek, AM Leeflang, T Brands, TPP van den Bosch, ... medRxiv, 2022.09. 20.22280164, 2022 | | 2022 |
1075P Tobacco smoking related mutational signatures (MS) in classifying smoking and non-smoking associated metastatic non-small cell lung cancer (mNSCLC) SM Ernst, J Mankor, J Van Riet, J von der Thüsen, HJ Dubbink, JG Aerts, ... Annals of Oncology 33, S1045, 2022 | | 2022 |
Increased sensitivity of SF3B1 mutated uveal melanoma by spliceosome inhibition J Nguyen, W Drabarek, A Leeflang, T Brands, T van den Bosch, R Verdijk, ... Investigative Ophthalmology & Visual Science 63 (7), 2348–A0017-2348–A0017, 2022 | 1 | 2022 |
MP54-07 A URINE-BASED MOLECULAR ASSAY REFINES THE RISK STRATIFICATION OF THE RECENT AMERICAN UROLOGICAL ASSOCIATION GUIDELINE ON HEMATURIA J de Jong, O Pijpers, K van Kessel, J Boormans, W van Criekinge, ... Journal of Urology 207 (Supplement 5), e928, 2022 | | 2022 |
CRISPRs in the human genome are differentially expressed between malignant and normal adjacent to tumor tissue J van Riet, C Saha, N Strepis, RWW Brouwer, ES Martens-Uzunova, ... Communications Biology 5 (1), 338, 2022 | 6 | 2022 |
Comprehensive molecular characterization reveals genomic and transcriptomic subtypes of metastatic urothelial carcinoma JA Nakauma-González, M Rijnders, J van Riet, MS van der Heijden, ... European urology 81 (4), 331-336, 2022 | 29 | 2022 |
The EGFRvIII transcriptome in glioblastoma: A meta-omics analysis Y Hoogstrate, SA Ghisai, M de Wit, I de Heer, K Draaisma, J van Riet, ... Neuro-oncology 24 (3), 429-441, 2022 | 15 | 2022 |
ProteoDisco: a flexible R approach to generate customized protein databases for extended search space of novel and variant proteins in proteogenomic studies WS van de Geer, J van Riet, HJG van de Werken Bioinformatics 38 (5), 1437-1439, 2022 | 4 | 2022 |
Identification of early-onset metastasis in SF3B1 mutated uveal melanoma W Drabarek, J van Riet, JQN Nguyen, KN Smit, NM van Poppelen, ... Cancers 14 (3), 846, 2022 | 12 | 2022 |
Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA–minus RNA sequencing data Y Hoogstrate, MA Komor, R Böttcher, J van Riet, HJG van de Werken, ... Gigascience 10 (12), giab080, 2021 | 8 | 2021 |